Genetic Diversity and Evolution of Viruses Infecting Felis catus: A Global Perspective

被引:3
作者
Le, Shi-Jia [1 ]
Xin, Gen-Yang [1 ]
Wu, Wei-Chen [1 ]
Shi, Mang [1 ]
机构
[1] Sun Yat Sen Univ, Sch Med, State Key Lab Biocontrol, Shenzhen Campus, Shenzhen 518107, Peoples R China
来源
VIRUSES-BASEL | 2023年 / 15卷 / 06期
基金
中国国家自然科学基金;
关键词
cats; virus; diversity; recombination; evolution; molecular epidemiology; VIRULENT SYSTEMIC-DISEASE; IMMUNODEFICIENCY VIRUS; LEUKEMIA-VIRUS; MOLECULAR CHARACTERIZATION; PHYLOGENETIC ANALYSIS; DOMESTIC CATS; FOAMY VIRUS; HERPESVIRUS TYPE-1; FECAL VIROME; 1ST REPORT;
D O I
10.3390/v15061338
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Cats harbor many important viral pathogens, and the knowledge of their diversity has been greatly expanded thanks to increasingly popular molecular sequencing techniques. While the diversity is mostly described in numerous regionally defined studies, there lacks a global overview of the diversity for the majority of cat viruses, and therefore our understanding of the evolution and epidemiology of these viruses was generally inadequate. In this study, we analyzed 12,377 genetic sequences from 25 cat virus species and conducted comprehensive phylodynamic analyses. It revealed, for the first time, the global diversity for all cat viruses known to date, taking into account highly virulent strains and vaccine strains. From there, we further characterized and compared the geographic expansion patterns, temporal dynamics and recombination frequencies of these viruses. While respiratory pathogens such as feline calicivirus showed some degree of geographical panmixes, the other viral species are more geographically defined. Furthermore, recombination rates were much higher in feline parvovirus, feline coronavirus, feline calicivirus and feline foamy virus than the other feline virus species. Collectively, our findings deepen the understanding of the evolutionary and epidemiological features of cat viruses, which in turn provide important insight into the prevention and control of cat pathogens.
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页数:22
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