Engineering Hydroxylase Activity, Selectivity, and Stability for a Scalable Concise Synthesis of a Key Intermediate to Belzutifan

被引:22
作者
Cheung-Lee, Wai Ling [1 ]
Kolev, Joshua N. [1 ]
Mcintosh, John A. [1 ]
Gil, Agnieszka A. [1 ]
Pan, Weilan [1 ]
Xiao, Li [2 ]
Velasquez, Juan E. [1 ]
Gangam, Rekha [3 ]
Winston, Matthew S. [1 ]
Li, Shasha [3 ]
Abe, Kotoe [4 ]
Alwedi, Embarek [1 ]
Dance, Zachary E. X. [3 ]
Fan, Haiyang [5 ]
Hiraga, Kaori [1 ]
Kim, Jungchul [1 ]
Kosjek, Birgit [1 ]
Le, Diane N. [1 ]
Marzijarani, Nastaran Salehi [1 ]
Mattern, Keith [1 ]
Mcmullen, Jonathan P. [1 ]
Narsimhan, Karthik [1 ]
Vikram, Ajit [1 ]
Wang, Wei [5 ]
Yan, Jia-Xuan [3 ]
Yang, Rong-Sheng [3 ]
Zhang, Victoria [1 ]
Zhong, Wendy [3 ]
Dirocco, Daniel A. [1 ]
Morris, William J. [1 ]
Murphy, Grant S. [1 ]
Maloney, Kevin M. [1 ]
机构
[1] Merck & Co Inc, Proc Res & Dev, Rahway, NJ 07065 USA
[2] Merck & Co Inc, Modeling & Informat, Discovery Chem, Rahway, NJ 07065 USA
[3] Merck & Co Inc, Analyt Res & Dev, Rahway, NJ 07065 USA
[4] Merck & Co Inc, Chem Commercializat Technol, Rahway, NJ 07065 USA
[5] Shanghai STA Pharmaceut Co Ltd, API Proc Res & Dev Biocatalysis, Shanghai 200131, Peoples R China
关键词
Hydroxylation; Biocatalysis; Directed Evolution; Enzyme Engineering; alpha-ketoglutarate-dependent dioxygenase; KETOGLUTARATE-DEPENDENT DIOXYGENASE; IN-VITRO; EVOLUTION; IRON; STRATEGIES; OXYGENASE; COMPLEX; ENZYMES; DESIGN; TAUD;
D O I
10.1002/anie.202316133
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Biocatalytic oxidations are an emerging technology for selective C-H bond activation. While promising for a range of selective oxidations, practical use of enzymes catalyzing aerobic hydroxylation is presently limited by their substrate scope and stability under industrially relevant conditions. Here, we report the engineering and practical application of a non-heme iron and alpha-ketoglutarate-dependent dioxygenase for the direct stereo- and regio-selective hydroxylation of a non-native fluoroindanone en route to the oncology treatment belzutifan, replacing a five-step chemical synthesis with a direct enantioselective hydroxylation. Mechanistic studies indicated that formation of the desired product was limited by enzyme stability and product overoxidation, with these properties subsequently improved by directed evolution, yielding a biocatalyst capable of >15,000 total turnovers. Highlighting the industrial utility of this biocatalyst, the high-yielding, green, and efficient oxidation was demonstrated at kilogram scale for the synthesis of belzutifan.
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页数:9
相关论文
共 63 条
  • [21] Novel Enzyme Family Found in Filamentous Fungi Catalyzing trans-4-Hydroxylation of L-Pipecolic Acid
    Hibi, Makoto
    Mori, Ryosuke
    Miyake, Ryoma
    Kawabata, Hiroshi
    Kozono, Shoko
    Takahashi, Satomi
    Ogawa, Jun
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2016, 82 (07) : 2070 - 2077
  • [22] Mutation Maker, An Open Source Oligo Design Platform for Protein Engineering
    Hiraga, Kaori
    Mejzlik, Petr
    Marcisin, Matej
    Vostrosablin, Nikita
    Gromek, Anna
    Arnold, Jakub
    Wiewiora, Sebastian
    Svarba, Rastislav
    Prihoda, David
    Clarova, Kamila
    Klempir, Ondrej
    Navratil, Josef
    Tupa, Ondrej
    Vazquez-Otero, Alejandro
    Walas, Marcin W.
    Holy, Lukas
    Spale, Martin
    Kotowski, Jakub
    Dzamba, David
    Temesi, Gergely
    Russell, Jay H.
    Marshall, Nicholas M.
    Murphy, Grant S.
    Bitton, Danny A.
    [J]. ACS SYNTHETIC BIOLOGY, 2021, 10 (02): : 357 - 370
  • [23] ENGINEERING HYBRID GENES WITHOUT THE USE OF RESTRICTION ENZYMES - GENE-SPLICING BY OVERLAP EXTENSION
    HORTON, RM
    HUNT, HD
    HO, SN
    PULLEN, JK
    PEASE, LR
    [J]. GENE, 1989, 77 (01) : 61 - 68
  • [24] Jacob K, 2000, EUR J ORG CHEM, V2000, P2047
  • [25] Hydroxylation of L-proline to cis-3-hydroxy-L-proline by recombinant Escherichia coli expressing a synthetic L-proline-3-hydroxylase gene
    Johnston, Robert M.
    Chu, Linda N.
    Liu, Mark
    Goldberg, Steven L.
    Goswami, Animesh
    Patel, Ramesh N.
    [J]. ENZYME AND MICROBIAL TECHNOLOGY, 2009, 45 (6-7) : 484 - 490
  • [26] Highly accurate protein structure prediction with AlphaFold
    Jumper, John
    Evans, Richard
    Pritzel, Alexander
    Green, Tim
    Figurnov, Michael
    Ronneberger, Olaf
    Tunyasuvunakool, Kathryn
    Bates, Russ
    Zidek, Augustin
    Potapenko, Anna
    Bridgland, Alex
    Meyer, Clemens
    Kohl, Simon A. A.
    Ballard, Andrew J.
    Cowie, Andrew
    Romera-Paredes, Bernardino
    Nikolov, Stanislav
    Jain, Rishub
    Adler, Jonas
    Back, Trevor
    Petersen, Stig
    Reiman, David
    Clancy, Ellen
    Zielinski, Michal
    Steinegger, Martin
    Pacholska, Michalina
    Berghammer, Tamas
    Bodenstein, Sebastian
    Silver, David
    Vinyals, Oriol
    Senior, Andrew W.
    Kavukcuoglu, Koray
    Kohli, Pushmeet
    Hassabis, Demis
    [J]. NATURE, 2021, 596 (7873) : 583 - +
  • [27] Kim J., 2024, UNPUB
  • [28] Biocatalytic control of site-selectivity and chain length selectivity in radical amino acid halogenases
    Kissman, Elijah N.
    Neugebauer, Monica E.
    Sumida, Kiera H.
    Swenson, Cameron, V
    Sambold, Nicholas A.
    Marchand, Jorge A.
    Millar, Douglas C.
    Chang, Michelle C. Y.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2023, 120 (12)
  • [29] Enzymatic C-H functionalizations for natural product synthesis
    Li, Fuzhuo
    Zhang, Xiao
    Renata, Hans
    [J]. CURRENT OPINION IN CHEMICAL BIOLOGY, 2019, 49 : 25 - 32
  • [30] AGGREGATION AND PRECIPITATION OF HUMAN RELAXIN INDUCED BY METAL-CATALYZED OXIDATION
    LI, SH
    NGUYEN, TH
    SCHONEICH, C
    BORCHARDT, RT
    [J]. BIOCHEMISTRY, 1995, 34 (17) : 5762 - 5772