Adaptive finite differencing in high accuracy electronic structure calculations

被引:3
|
作者
Briggs, E. L. [1 ]
Lu, Wenchang [1 ,2 ]
Bernholc, J. [1 ,2 ]
机构
[1] North Carolina State Univ, Dept Phys, Raleigh, NC 27695 USA
[2] Oak Ridge Natl Lab, Computat Sci & Engn Div, Oak Ridge, TN 37831 USA
关键词
DENSITY-FUNCTIONAL THEORY; EFFECTIVE CORE POTENTIALS; PARALLEL IMPLEMENTATION; MOLECULAR CALCULATIONS; SPARC ACCURATE; LOCAL-DENSITY; PSEUDOPOTENTIALS; COMPUTATION; FORMULATION; EQUATIONS;
D O I
10.1038/s41524-024-01203-y
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A multi-order Adaptive Finite Differencing (AFD) method is developed for the kinetic energy operator in real-space, grid-based electronic structure codes. It uses atomic pseudo orbitals produced by the corresponding pseudopotential codes to optimize the standard finite difference (SFD) operators for improved precision. Results are presented for a variety of test systems and Bravais lattice types, including the well-known Delta test for 71 elements in the periodic table, the Mott insulator NiO, and borax decahydrate, which contains covalent, ionic, and hydrogen bonds. The tests show that an 8th-order AFD operator leads to the same average Delta value as that achieved by plane-wave codes and is typically far more accurate and has a much lower computational cost than a 12th-order SFD operator. The scalability of real-space electronic calculations is demonstrated for a 2016-atom NiO cell, for which the computational time decreases nearly linearly when scaled from 18 to 144 CPU-GPU nodes.
引用
收藏
页数:9
相关论文
共 50 条
  • [1] Interpolation Based Local Postprocessing for Adaptive Finite Element Approximations in Electronic Structure Calculations
    Fang, Jun
    Gao, Xingyu
    Gong, Xingao
    Zhou, Aihui
    DOMAIN DECOMPOSITION METHODS IN SCIENCE AND ENGINEERING XIX, 2011, 78 : 51 - +
  • [2] AN ADAPTIVE PLANEWAVE METHOD FOR ELECTRONIC STRUCTURE CALCULATIONS
    Liu, Beilei
    Chen, Huajie
    Dusson, Genevieve
    Fang, Jun
    Gao, Xingyu
    MULTISCALE MODELING & SIMULATION, 2022, 20 (01) : 524 - 550
  • [3] FINITE VOLUME DISCRETIZATIONS FOR EIGENVALUE PROBLEMS WITH APPLICATIONS TO ELECTRONIC STRUCTURE CALCULATIONS
    Dai, Xiaoying
    Gong, Xingao
    Yang, Zhang
    Zhang, Dier
    Zhou, Aihui
    MULTISCALE MODELING & SIMULATION, 2011, 9 (01) : 208 - 240
  • [4] Large-scale electronic-structure calculations based on the adaptive finite-element method
    Tsuchida, E
    Tsukada, M
    JOURNAL OF THE PHYSICAL SOCIETY OF JAPAN, 1998, 67 (11) : 3844 - 3858
  • [5] An h-adaptive finite element solver for the calculations of the electronic structures
    Bao, Gang
    Hu, Guanghui
    Liu, Di
    JOURNAL OF COMPUTATIONAL PHYSICS, 2012, 231 (14) : 4967 - 4979
  • [6] Daubechies wavelets for high performance electronic structure calculations: The BigDFT project
    Genovese, Luigi
    Videau, Brice
    Ospici, Matthieu
    Deutsch, Thierry
    Goedecker, Stefan
    Mehaut, Jean-Francois
    COMPTES RENDUS MECANIQUE, 2011, 339 (2-3): : 149 - 164
  • [7] On the Accuracy of the Direct Method to Calculate pKa from Electronic Structure Calculations
    Dutra, Felipe Ribeiro
    Silva, Cleuton de Souza
    Custodio, Rogerio
    JOURNAL OF PHYSICAL CHEMISTRY A, 2021, 125 (01) : 65 - 73
  • [8] A Survey of the Parallel Performance and Accuracy of Poisson Solvers for Electronic Structure Calculations
    Garcia-Risueno, Pablo
    Alberdi-Rodriguez, Joseba
    Oliveira, Micael J. T.
    Andrade, Xavier
    Pippig, Michael
    Muguerza, Javier
    Arruabarrena, Agustin
    Rubio, Angel
    JOURNAL OF COMPUTATIONAL CHEMISTRY, 2014, 35 (06) : 427 - 444
  • [9] Finite Element Method in Density Functional Theory Electronic Structure Calculations
    Vackar, Jiri
    Certik, Ondrej
    Cimrman, Robert
    Novak, Matyas
    Sipr, Ondrej
    Plesek, Jiri
    ADVANCES IN THE THEORY OF QUANTUM SYSTEMS IN CHEMISTRY AND PHYSICS, 2012, 22 : 199 - 217
  • [10] Theory of the special displacement method for electronic structure calculations at finite temperature
    Zacharias, Marios
    Giustino, Feliciano
    PHYSICAL REVIEW RESEARCH, 2020, 2 (01):