Network Pharmacology and Molecular Modeling Techniques in Unraveling the Underlying Mechanism of Citri Reticulatae Pericarpium aganist Type 2 Diabetic Osteoporosis

被引:6
作者
Li, Jiangtao [1 ,2 ]
Wang, Ying [1 ,2 ]
Ullah, Amin [3 ]
Zhang, Ruiyang [1 ,2 ]
Sun, Yuge [1 ,2 ]
Li, Jinjie [1 ,2 ]
Kou, Guangning [1 ,2 ,3 ]
机构
[1] Zhengzhou Univ, Ctr Nutr Ecol, Zhengzhou 450001, Peoples R China
[2] Zhengzhou Univ, Ctr Sport Nutr & Hlth, Zhengzhou 450001, Peoples R China
[3] Zhengzhou Univ, Sch Publ Hlth, Dept Nutr & Food Hyg, Zhengzhou 450001, Peoples R China
基金
中国国家自然科学基金;
关键词
Citri Reticulatae Pericarpium; type 2 diabetic osteoporosis; network pharmacology; molecular docking; molecular dynamics simulations; KAPPA-B; BONE; DYNAMICS; OSTEOCLASTOGENESIS; DIFFERENTIATION; PARAMETERS; HESPERIDIN; MELLITUS; RECEPTOR; PATHWAY;
D O I
10.3390/nu16020220
中图分类号
R15 [营养卫生、食品卫生]; TS201 [基础科学];
学科分类号
100403 ;
摘要
Type 2 diabetic osteoporosis (T2DOP) is a common complication in diabetic patients that seriously affects their health and quality of life. The pathogenesis of T2DOP is complex, and there are no targeted governance means in modern medicine. Citri Reticulatae Pericarpium (CRP) is a traditional Chinese medicine that has a long history and has been used in the treatment of osteoporosis diseases. However, the molecular mechanism for the CRP treatment of T2DOP is not clear. Therefore, this study aimed to explore the underlying mechanisms of CRP for the treatment of T2DOP by using network pharmacology and molecular modeling techniques. By retrieving multiple databases, we obtained 5 bioactive compounds and 63 common targets of bioactive compounds with T2DOP, and identified AKT 1, TP 53, JUN, BCL 2, MAPK 1, NFKB 1, and ESR 1 as the core targets of their PPI network. Enrichment analysis revealed that these targets were mainly enriched in the estrogen signaling pathway, TNF signaling pathway, and AGE-RAGE signaling pathway in diabetics, which were mainly related to oxidative stress and hormonal regulation. Molecular docking and molecular dynamics simulations have shown the excellent binding effect of the bioactive compounds of CRP and the core targets. These findings reveal that CRP may ameliorate T2DOP through multiple multicomponent and multitarget pathways.
引用
收藏
页数:15
相关论文
共 60 条
[41]   A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules [J].
Tong, AHY ;
Drees, B ;
Nardelli, G ;
Bader, GD ;
Brannetti, B ;
Castagnoli, L ;
Evangelista, M ;
Ferracuti, S ;
Nelson, B ;
Paoluzi, S ;
Quondam, M ;
Zucconi, A ;
Hogue, CWV ;
Fields, S ;
Boone, C ;
Cesareni, G .
SCIENCE, 2002, 295 (5553) :321-324
[42]   Molecular Mechanism of Hesperetin-7-O-glucuronide, the Main Circulating Metabolite of Hesperidin, Involved in Osteoblast Differentiation [J].
Trzeciakiewicz, Anna ;
Habauzit, Veronique ;
Mercier, Sylvie ;
Barron, Denis ;
Urpi-Sarda, Mireia ;
Manach, Claudine ;
Offord, Elizabeth ;
Horcajada, Marie-Noelle .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2010, 58 (01) :668-675
[43]   Pharmacological inhibition of BCL-2 with the FDA-approved drug venetoclax impairs longitudinal bone growth [J].
Velentza, Lilly ;
Wickstrom, Malin ;
Kogner, Per ;
Ohlsson, Claes ;
Zaman, Farasat ;
Savendahl, Lars .
SCIENTIFIC REPORTS, 2023, 13 (01)
[44]   Electrospun sandwich mesh structures loaded with naringenin and vitamin K2 polycaprolactone/gelatin nanofibers synergistically promote bone regeneration [J].
Wang, Jiafeng ;
Shao, Longhui ;
Wu, Xiaoyu ;
Liu, Chun ;
Ni, Su ;
Dai, Ting ;
Liu, Hongwei ;
Zhao, Hongbin .
MATERIALS TODAY BIO, 2023, 23
[45]  
Wang JM, 2001, ABSTR PAP AM CHEM S, V222, pU403
[46]   Development and testing of a general amber force field [J].
Wang, JM ;
Wolf, RM ;
Caldwell, JW ;
Kollman, PA ;
Case, DA .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2004, 25 (09) :1157-1174
[47]   Citri Reticulatae Pericarpium (Chenpi) Protects against Endothelial Dysfunction and Vascular Inflammation in Diabetic Rats [J].
Wang, Yuehan ;
Zhang, Xutao ;
Zhou, Chunxiu ;
Khan, Haroon ;
Fu, Manqin ;
Cheang, Wai San .
NUTRIENTS, 2022, 14 (24)
[48]   Oxidative stress in bone remodelling and disease [J].
Wauquier, Fabien ;
Leotoing, Laurent ;
Coxam, Veronique ;
Guicheux, Jerome ;
Wittrant, Yohann .
TRENDS IN MOLECULAR MEDICINE, 2009, 15 (10) :468-477
[49]  
Weiser J, 1999, J COMPUT CHEM, V20, P217, DOI 10.1002/(SICI)1096-987X(19990130)20:2<217::AID-JCC4>3.0.CO
[50]  
2-A