Nanozyme-assisted amplification-free CRISPR/Cas system realizes visual detection

被引:3
|
作者
Zhang, Yuan [1 ]
Yu, Wanpeng [2 ]
Wang, Man [1 ]
Zhang, Lei [1 ]
Li, Peifeng [1 ]
机构
[1] Qingdao Univ, Inst Translat Med, Affiliated Hosp, Qingdao, Peoples R China
[2] Qingdao Univ, Med Coll, Qingdao, Peoples R China
关键词
nanozymes; CRISPR/Cas system; colorimetry; fluorescence; visual detection; EVOLUTIONARY CLASSIFICATION; PADLOCK PROBES; DNA;
D O I
10.3389/fbioe.2023.1327498
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The CRISPR (clustered regularly interspaced short palindromic repeats)/Cas (CRISPR associated) system has proven to be a powerful tool for nucleic acid detection due to its inherent advantages of effective nucleic acid identification and editing capabilities, and is therefore known as the next-generation of molecular diagnostic technology. However, the detection technologies based on CRISPR/Cas systems require preamplification of target analytes; that is, target gene amplification steps through isothermal amplification or PCR before detection to increase target analyte concentrations. This creates a number of testing limitations, such as extended testing time and the need for more sophisticated testing instruments. To overcome the above limitations, various amplification-free assay strategies based on CRISPR/Cas systems have been explored as alternatives, which omit the preamplification step to increase the concentrations of the target analytes. Nanozymes play a pivotal role in enhancing the sensitivity of CRISPR-based detection, enabling visual and rapid CRISPR assays. The utilization of nanozyme exceptional enzyme-like catalytic activity holds great promise for signal amplification in both electrochemical and optical domains, encompassing strategies for electrochemical signal sensors and colorimetric signal sensors. Rather than relying on converting a single detection target analyte into multiple analytes, these methods focus on signal amplification, the main mechanism of which involves the ability to form a large number of reporter molecules or to improve the performance of the sensor. This exploitation of nanozymes for signal amplification results in the heightened sensitivity and accuracy of detection outcomes. In addition to the strategies that improve sensor performance through the application of nanozymes, additional methods are needed to achieve visual signal amplification strategies without preamplification processes. Herein, we review the strategies for improving CRISPR/Cas systems that do not require preamplification, providing a simple, intuitive and preamplification-free CRISPR/Cas system detection platform by improving in-system one-step amplification programs, or enhancing nanozyme-mediated signal amplification strategies.
引用
收藏
页数:16
相关论文
共 50 条
  • [11] Harnessing Multiplex crRNA in the CRISPR/Cas12a System Enables an Amplification-Free DNA Diagnostic Platform for ASFV Detection
    Zeng, Muchu
    Ke, Yuqing
    Zhuang, Zhiyi
    Qin, Chao
    Li, Lai Yan
    Sheng, Gaoyuan
    Li, Zhuoru
    Meng, He
    Ding, Xianting
    ANALYTICAL CHEMISTRY, 2022, 94 (30) : 10805 - 10812
  • [12] Enzyme Kinetics and Detector Sensitivity Determine Limits of Detection of Amplification-Free CRISPR-Cas12 and CRISPR-Cas13 Diagnostics
    Huyke, Diego A.
    Ramachandran, Ashwin
    Bashkirov, Vladimir, I
    Kotseroglou, Efthalia K.
    Kotseroglou, Theofilos
    Santiago, Juan G.
    ANALYTICAL CHEMISTRY, 2022, : 9826 - 9834
  • [13] CRISPR-Cas, Argonaute proteins and the emerging landscape of amplification-free diagnostics
    Santiago-Frangos, Andrew
    Nemudryi, Artem
    Nemudraia, Anna
    Wiegand, Tanner
    Nichols, Joseph E.
    Krishna, Pushya
    Scherffius, Andrew M.
    Zahl, Trevor R.
    Wilkinson, Royce A.
    Wiedenheft, Blake
    METHODS, 2022, 205 : 1 - 10
  • [14] Bimetallic Nanozyme-Assisted Immunoassay for the Detection of Acetamiprid in Vegetables
    Liu, Beibei
    Zhai, Rongqi
    Abd El-Aty, A. M.
    Zhang, Jie
    Liu, Guangyang
    Huang, Xiaodong
    Lv, Jun
    Chen, Jing
    Liu, Junjiang
    Jin, Maojun
    Wang, Jing
    Xu, Donghui
    Chen, Ge
    ACS APPLIED NANO MATERIALS, 2024, 7 (18) : 21833 - 21841
  • [15] Dual-Functional Tetrahedron Multivalent Aptamer Assisted Amplification-Free CRISPR/Cas12a Assay for Sensitive Detection of Salmonella
    Qiao, Zhaohui
    Xue, Liangliang
    Sun, Mengni
    Ma, Na
    Shi, Hanxing
    Yang, Wenge
    Cheong, Ling-Zhi
    Huang, Xiaolin
    Xiong, Yonghua
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2023, 72 (01) : 857 - 864
  • [16] A CRISPR/Cas12a-SERS platform for amplification-free detection of African swine fever virus genes
    Wang, Huimin
    Su, Ailing
    Bao, Chengxin
    Liang, Chongyang
    Xu, Weiqing
    Chang, Jingjing
    Xu, Shuping
    TALANTA, 2024, 267
  • [17] A minimal transcription template-based amplification-free CRISPR-Cas13a strategy for DNA detection
    Zhuang, Tianchi
    Gao, Chang
    Zhao, Wenwu
    Yu, Hairong
    Liu, Yun
    Zhang, Ning
    Li, Ning
    Ji, Minghui
    BIOSENSORS & BIOELECTRONICS, 2025, 270
  • [18] Amplification-free detection of plant pathogens by improved CRISPR-Cas12a systems: a case study on phytoplasma
    Lagner, Joseph R.
    Newberry, Eric A.
    Rivera, Yazmin
    Zhang, Liyang
    Vakulskas, Christopher A.
    Qi, Yiping
    FRONTIERS IN PLANT SCIENCE, 2025, 16
  • [19] Multiple crRNAs-assisted CRISPR/Cas12a assay targeting cytochrome b gene for amplification-free detection of meat adulteration
    Chen, Yanju
    Yang, Tianyi
    Qian, Siwenjie
    Peng, Cheng
    Wang, Xiaofu
    Wang, Tingzhang
    Che, Yang
    Ji, Feng
    Wu, Jian
    Xu, Junfeng
    ANALYTICA CHIMICA ACTA, 2022, 1231
  • [20] An amplification-free ultra-sensitive electrochemical CRISPR/Cas biosensor for drug-resistant bacteria detection
    Suea-Ngam, Akkapol
    Howes, Philip D.
    DeMello, Andrew J.
    CHEMICAL SCIENCE, 2021, 12 (38) : 12733 - 12743