Decoding the underlying mechanisms of Di-Tan-Decoction in treating intracerebral hemorrhage based on network pharmacology

被引:4
作者
Zhen, Zheng [1 ]
Xue, Dao-jin [1 ]
Chen, Yu-peng [2 ,3 ]
Li, Jia-hui [2 ,3 ]
Gao, Yao [4 ]
Shen, You-bi [1 ]
Peng, Zi-zhuang [1 ]
Zhang, Nan [5 ]
Wang, Ke-xin [5 ]
Guan, Dao-gang [2 ,3 ,6 ]
Huang, Tao [1 ]
机构
[1] Guangzhou Univ Chinese Med, Affiliated Hosp 2, Guangzhou, Peoples R China
[2] Southern Med Univ, Sch Basic Med Sci, Dept Biochem & Mol Biol, Guangzhou, Peoples R China
[3] Guangdong Prov Key Lab Single Cell Technol & Appli, Guangzhou, Guangdong, Peoples R China
[4] Shanxi Med Univ, Hosp 1, Dept Psychiat, Clin Med Coll 1, Taiyuan 030001, Peoples R China
[5] Southern Med Univ, Zhujiang Hosp, Neurosurg Ctr, Engn Technol Res Ctr Educ Minist China Diag & Trea, Guangzhou 510280, Guangdong, Peoples R China
[6] Southern Med Univ, Sch Basic Med Sci, Dept Bioinformat, Guangzhou, Peoples R China
基金
中国国家自然科学基金;
关键词
Traditional chinese medicine (TCM); Intracerebral hemorrhage (ICH); Important gene network motif; Mechanism; System pharmacology; CHIP-SEQ; EXPRESSION; DATABASE;
D O I
10.1186/s12906-022-03831-7
中图分类号
R [医药、卫生];
学科分类号
10 ;
摘要
BackgroundChinese medicine usually acts as "multi-ingredients, multi-targets and multi-pathways" on complex diseases, and these action modes reflect the coordination and integrity of the treatment process with traditional Chinese medicine (TCM). System pharmacology is developed based on the cross-disciplines of directional pharmacology, system biology, and mathematics, has the characteristics of integrity and synergy in the treatment process of TCM. Therefore, it is suitable for analyzing the key ingredients and mechanisms of TCM in treating complex diseases. Intracerebral Hemorrhage (ICH) is one of the leading causes of death in China, with the characteristics of high mortality and disability rate. Bring a significant burden on people and society. An increasing number of studies have shown that Chinese medicine prescriptions have good advantages in the treatment of ICH, and Ditan Decoction (DTT) is one of the commonly used prescriptions in the treatment of ICH. Modern pharmacological studies have shown that DTT may play a therapeutic role in treating ICH by inhibiting brain inflammation, abnormal oxidative stress reaction and reducing neurological damage, but the specific key ingredients and mechanism are still unclear.MethodsTo solve this problem, we established PPI network based on the latest pathogenic gene data of ICH, and CT network based on ingredient and target data of DTT. Subsequently, we established optimization space based on PPI network and CT network, and constructed a new model for node importance calculation, and proposed a calculation method for PES score, thus calculating the functional core ingredients group (FCIG). These core functional groups may represent DTT therapy for ICH.ResultsBased on the strategy, 44 ingredients were predicted as FCIG, results showed that 80.44% of the FCIG targets enriched pathways were coincided with the enriched pathways of pathogenic genes. Both the literature and molecular docking results confirm the therapeutic effect of FCIG on ICH via targeting MAPK signaling pathway and PI3K-Akt signaling pathway.ConclusionsThe FCIG obtained by our network pharmacology method can represent the effect of DTT in treating ICH. These results confirmed that our strategy of active ingredient group optimization and the mechanism inference could provide methodological reference for optimization and secondary development of TCM.
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页数:21
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