Spectral encoder to extract the efficient features of Raman spectra for reliable and precise quantitative analysis

被引:1
作者
Gao, Chi [1 ,2 ,3 ]
Fan, Qi [1 ,2 ]
Zhao, Peng [1 ,2 ,3 ]
Sun, Chao [1 ,2 ]
Dang, Ruochen [1 ,2 ,3 ]
Feng, Yutao [1 ,2 ]
Hu, Bingliang [1 ,2 ]
Wang, Quan [1 ,2 ]
机构
[1] Chinese Acad Sci, Key Lab Spectral Imaging Technol, Xian Inst Opt & Precis Mech, Xian 710076, Shaanxi, Peoples R China
[2] Key Lab Biomed Spect Xian, Xian 710076, Shaanxi, Peoples R China
[3] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
关键词
Raman spectroscopy; Quantitative analysis; Deep learning; Spectral encoder; Feature extraction; Latent encoded feature; SPECTROSCOPY; IDENTIFICATION; MIXTURES; TOOLS;
D O I
10.1016/j.saa.2024.124036
中图分类号
O433 [光谱学];
学科分类号
0703 ; 070302 ;
摘要
Raman spectroscopy has become a powerful analytical tool highly demanded in many applications such as microorganism sample analysis, food quality control, environmental science, and pharmaceutical analysis, owing to its non-invasiveness, simplicity, rapidity and ease of use. Among them, quantitative research using Raman spectroscopy is a crucial application field of spectral analysis. However, the entire process of quantitative modeling largely relies on the extraction of effective spectral features, particularly for measurements on complex samples or in environments with poor spectral signal quality. In this paper, we propose a method of utilizing a spectral encoder to extract effective spectral features, which can significantly enhance the reliability and precision of quantitative analysis. We built a latent encoded feature regression model; in the process of utilizing the autoencoder for reconstructing the spectrometer output, the latent feature obtained from the intermediate bottleneck layer is extracted. Then, these latent features are fed into a deep regression model for component concentration prediction. Through detailed ablation and comparative experiments, our proposed model demonstrates superior performance to common methods on single -component and multicomponent mixture datasets, remarkably improving regression precision while without needing user -selected parameters and eliminating the interference of irrelevant and redundant information. Furthermore, in-depth analysis reveals that latent encoded feature possesses strong nonlinear feature representation capabilities, low computational costs, wide adaptability, and robustness against noise interference. This highlights its effectiveness in spectral regression tasks and indicates its potential in other application fields. Sufficient experimental results show that our proposed method provides a novel and effective feature extraction approach for spectral analysis, which is simple, suitable for various methods, and can meet the measurement needs of different real -world scenarios.
引用
收藏
页数:15
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共 67 条
[1]   Applications of Raman spectroscopy in cancer diagnosis [J].
Auner, Gregory W. ;
Koya, S. Kiran ;
Huang, Changhe ;
Broadbent, Brandy ;
Trexler, Micaela ;
Auner, Zachary ;
Elias, Angela ;
Mehne, Katlyn Curtin ;
Brusatori, Michelle A. .
CANCER AND METASTASIS REVIEWS, 2018, 37 (04) :691-717
[2]   A Modified Least-Squares Method for Quantitative Analysis in Raman Spectroscopy [J].
Bai, Yanru ;
Yuen, Clement ;
Liu, Quan .
IEEE JOURNAL OF SELECTED TOPICS IN QUANTUM ELECTRONICS, 2021, 27 (04)
[3]   Identification of oral bacteria by Raman microspectroscopy [J].
Berger, AJ ;
Zhu, QY .
JOURNAL OF MODERN OPTICS, 2003, 50 (15-17) :2375-2380
[4]   Multicomponent Raman spectral regression using complete and incomplete models and convolutional neural networks [J].
Boateng, Derrick ;
Hu, Chuanzhen ;
Dai, Yichuan ;
Chu, Kaiqin ;
Du, Jun ;
Smith, Zachary J. .
ANALYST, 2022, 147 (20) :4607-4615
[5]   On-line multi-gas component measurement in the mud logging process based on Raman spectroscopy combined with a CNN-LSTM-AM hybrid model [J].
Cai, Yaoyi ;
Xu, Guorong ;
Yang, Dewang ;
Tian, Haoyue ;
Zhou, Faju ;
Guo, Jinjia .
ANALYTICA CHIMICA ACTA, 2023, 1259
[6]   Raman spectroscopy in quality control of Chinese herbal medicine [J].
Chen, Dan-Dan ;
Xie, Xiao-Fang ;
Ao, Hui ;
Liu, Ji-Lei ;
Peng, Cheng .
JOURNAL OF THE CHINESE MEDICAL ASSOCIATION, 2017, 80 (05) :288-296
[7]   Quantitative Analysis of Microbicide Concentrations in Fluids, Gels and Tissues Using Confocal Raman Spectroscopy [J].
Chuchuen, Oranat ;
Henderson, Marcus H. ;
Sykes, Craig ;
Kim, Min Sung ;
Kashuba, Angela D. M. ;
Katz, David F. .
PLOS ONE, 2013, 8 (12)
[8]   Surface enhanced Raman spectroscopy: new materials, concepts, characterization tools, and applications [J].
Dieringer, JA ;
McFarland, AD ;
Shah, NC ;
Stuart, DA ;
Whitney, AV ;
Yonzon, CR ;
Young, MA ;
Zhang, XY ;
Van Duyne, RP .
FARADAY DISCUSSIONS, 2006, 132 :9-26
[9]   A practical convolutional neural network model for discriminating Raman spectra of human and animal blood [J].
Dong, Jialin ;
Hong, Mingjian ;
Xu, Yi ;
Zheng, Xiangquan .
JOURNAL OF CHEMOMETRICS, 2019, 33 (11)
[10]   Spectral Encoder to Extract the Features of Near-Infrared Spectra for Multivariate Calibration [J].
Duan, Chaoshu ;
Liu, Xuyang ;
Cai, Wensheng ;
Shao, Xueguang .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2022, 62 (16) :3695-3703