Off-target effects in CRISPR/Cas9 gene editing

被引:147
|
作者
Guo, Congting [1 ,2 ]
Ma, Xiaoteng [3 ]
Gao, Fei [3 ]
Guo, Yuxuan [1 ,2 ,4 ,5 ]
机构
[1] Peking Univ, Sch Basic Med Sci, Hlth Sci Ctr, Beijing, Peoples R China
[2] Peking Univ, Inst Cardiovasc Sci, Beijing, Peoples R China
[3] Capital Med Univ, Beijing Anzhen Hosp, Dept Cardiol, Beijing, Peoples R China
[4] Minist Educ Key Lab Mol Cardiovasc Sci, Beijing, Peoples R China
[5] Beijing Key Lab Cardiovasc Receptors Res, Beijing, Peoples R China
基金
中国国家自然科学基金; 国家重点研发计划;
关键词
off-target effects; gene editing; CRISPR/Cas9; gene therapy; Cas9/sgRNA complex; GENOME-WIDE ANALYSIS; DOUBLE-STRANDED BREAKS; CRISPR-CAS9; NUCLEASES; UNBIASED DETECTION; HUMAN-CELLS; CAS9; DNA; SEQ; DELIVERY; BASE;
D O I
10.3389/fbioe.2023.1143157
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Gene editing stands for the methods to precisely make changes to a specific nucleic acid sequence. With the recent development of the clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 system, gene editing has become efficient, convenient and programmable, leading to promising translational studies and clinical trials for both genetic and non-genetic diseases. A major concern in the applications of the CRISPR/Cas9 system is about its off-target effects, namely the deposition of unexpected, unwanted, or even adverse alterations to the genome. To date, many methods have been developed to nominate or detect the off-target sites of CRISPR/Cas9, which laid the basis for the successful upgrades of CRISPR/Cas9 derivatives with enhanced precision. In this review, we summarize these technological advancements and discuss about the current challenges in the management of off-target effects for future gene therapy.
引用
收藏
页数:11
相关论文
共 50 条
  • [21] Detection of on-target and off-target mutations generated by CRISPR/Cas9 and other sequence-specific nucleases
    Zischewski, Julia
    Fischer, Rainer
    Bortesi, Luisa
    BIOTECHNOLOGY ADVANCES, 2017, 35 (01) : 95 - 104
  • [22] Latest Developed Strategies to Minimize the Off-Target Effects in CRISPR-Cas-Mediated Genome Editing
    Naeem, Muhammad
    Majeed, Saman
    Hoque, Mubasher Zahir
    Ahmad, Irshad
    CELLS, 2020, 9 (07)
  • [23] Synthetic switch to minimize CRISPR off-target effects by self-restricting Cas9 transcription and translation
    Shen, Chih-Che
    Hsu, Mu-Nung
    Chang, Chin-Wei
    Lin, Mei-Wei
    Hwu, Jih-Ru
    Tu, Yi
    Hu, Yu-Chen
    NUCLEIC ACIDS RESEARCH, 2019, 47 (03)
  • [24] Minimizing off-target effects in CRISPR-Cas9 genome editing
    Chen, Shi-Jie
    CELL BIOLOGY AND TOXICOLOGY, 2019, 35 (05) : 399 - 401
  • [25] Recent advances of CRISPR/Cas9 gene editing in the treatment of β-thalassemia
    Jie, Qian
    Lei, Shuangyin
    Qu, Chao
    Wu, Hao
    Liu, Yingru
    Huang, Ping
    Teng, Shuzhi
    CHINESE SCIENCE BULLETIN-CHINESE, 2022, 67 (21): : 2492 - 2508
  • [26] Gene editing in mouse zygotes using the CRISPR/Cas9 system
    Wefers, Benedikt
    Bashir, Sanum
    Rossius, Jana
    Wurst, Wolfgang
    Kuehn, Ralf
    METHODS, 2017, 121 : 55 - 67
  • [27] Overcoming the Limitations of CRISPR-Cas9 Systems in Saccharomyces cerevisiae: Off-Target Effects, Epigenome, and Mitochondrial Editing
    Sato, Genki
    Kuroda, Kouichi
    MICROORGANISMS, 2023, 11 (04)
  • [28] DNA stretching induces Cas9 off-target activity
    Newton, Matthew D.
    Taylor, Benjamin J.
    Driessen, Rosalie P. C.
    Roos, Leonie
    Cvetesic, Nevena
    Allyjaun, Shenaz
    Lenhard, Boris
    Cuomo, Maria Emanuela
    Rueda, David S.
    NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2019, 26 (03) : 185 - +
  • [29] Prospects and challenges of CRISPR/Cas9 gene-editing technology in cancer research
    Ning, Li
    Xi, Jiahui
    Zi, Yin
    Chen, Min
    Zou, Qingjian
    Zhou, Xiaoqing
    Tang, Chengcheng
    CLINICAL GENETICS, 2023, 104 (06) : 613 - 624
  • [30] Avoiding the off-target effects of CRISPR/cas9 system is still a challenging accomplishment for genetic transformation
    Herai, Roberto H.
    GENE, 2019, 700 : 176 - 178