The International Oryza Map Alignment Project (IOMAP): the Americas-past achievements and future directions

被引:7
作者
Alsantely, Aseel [1 ]
Gutaker, Rafal [2 ]
Navarrete Rodriguez, Maria E. [1 ]
Arrieta-Espinoza, Griselda [3 ]
Fuchs, Eric J. [4 ]
de Oliveira, Antonio Costa [5 ]
Tohme, Joe [6 ]
Zuccolo, Andrea [1 ,7 ]
Wing, Rod A. [1 ,8 ]
Fornasiero, Alice [1 ]
机构
[1] King Abdullah Univ Sci & Technol KAUST, Ctr Desert Agr, Biol & Environm Sci & Engn Div BESE, Thuwal 239556900, Saudi Arabia
[2] Royal Bot Gardens, Kew, Richmond TW9 3AE, Surrey, England
[3] Univ Costa Rica, Ctr Invest Biol Celular & Mol, San Jose 115012050, Costa Rica
[4] Univ Costa Rica, Escuela Biol, San Jose 115012060, Costa Rica
[5] Univ Fed Pelotas, Plant Genom & Breeding Ctr, Eliseu Maciel Sch Agron, Pelotas RS, Pelotas, RS, Brazil
[6] Int Ctr Trop Agr CIAT, Cali 763537, Colombia
[7] St Anna Sch Adv Studies, Crop Sci Res Ctr, I-56127 Pisa, Italy
[8] Univ Arizona, Arizona Genom Inst, Sch Plant Sci, Tucson, AZ 85721 USA
关键词
Biodiversity conservation; genetic diversity; herbaria specimens; in situ specimens; IOMAP; neodomestication; population genetics; resistance traits; wild relatives of rice in the Americas; DE-NOVO DOMESTICATION; CROP WILD RELATIVES; GENETIC DIVERSITY; GENUS-WIDE; PHYLOGENETIC-RELATIONSHIPS; SUBMERGENCE TOLERANCE; GENOME EVOLUTION; RICE; RESISTANCE; CONSERVATION;
D O I
10.1093/jxb/erac490
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
We review the relevance and major outcomes of IOMAP to the wild Oryzaspecies in the Americas, focusing on biodiversity conservation, and discuss achievements and future implications of the neodomestication of Oryza alta. The wild relatives of rice hold unexplored genetic diversity that can be employed to feed an estimated population of 10 billion by 2050. The Oryza Map Alignment Project (OMAP) initiated in 2003 has provided comprehensive genomic resources for comparative, evolutionary, and functional characterization of the wild relatives of rice, facilitating the cloning of >600 rice genes, including those for grain width (GW5) and submergence tolerance (SUB1A). Following in the footsteps of the original project, the goal of 'IOMAP: the Americas' is to investigate the present and historic genetic diversity of wild Oryza species endemic to the Americas through the sequencing of herbaria and in situ specimens. The generation of a large diversity panel describing past and current genetic status and potential erosion of genetic variation in the populations will provide useful knowledge for the conservation of the biodiversity in these species. The wild relatives of rice in the Americas present a wide range of resistance traits useful for crop improvement and neodomestication approaches. In the race against time for a sustainable food future, the neodomestication of the first cereal species recently accomplished in O. alta opens the door to the potential neodomestication of the other wild Oryza species in Americas.
引用
收藏
页码:1331 / 1342
页数:12
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