Network pharmacology and molecular docking analysis of Catharanthus roseus compounds: Implications for non-small cell lung cancer treatment

被引:3
作者
Alsaif, Ghaida [1 ,2 ]
Tasleem, Munazzah [3 ]
Rezgui, Raja [1 ]
Alshaghdali, Khalid [1 ,2 ]
Saeed, Amir [1 ,4 ,5 ]
Saeed, Mohd [4 ]
机构
[1] Univ Hail, Coll Appl Med Sci, Dept Clin Lab Sci, Hail 55473, Saudi Arabia
[2] Univ Hail, Med & Diagnost Res Ctr, Hail 55473, Saudi Arabia
[3] Jamia Hamdard, Dept Biochem, Delhi, India
[4] Univ Hail, Coll Sci, Dept Biol, Hail 55473, Saudi Arabia
[5] Univ Med Sci & Technol, Fac Med Lab Sci, Dept Med Microbiol, Khartoum, Sudan
关键词
Catharanthus roseus; BCL-2; receptor; Non -small cell lung cancer (NSCLC); Network pharmacology; Molecular docking;
D O I
10.1016/j.jksus.2024.103134
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The prevalence of non-small cell lung cancer (NSCLC), particularly in the Eastern Region of Saudi Arabia, is concerning and highlights the need for novel treatments, despite recent progress in NSCLC treatment. Plantderived natural compounds, such as those found in Catharanthus roseus, have shown promising results in cancer research. By employing cutting-edge computational analysis techniques, such as molecular docking and network pharmacology, the study aimed to understand the mechanism of action of compounds isolated from C. roseus. The study identified several bioactive and drug-like compounds in C. roseus that displayed diverse interactions with important proteins associated with cancer. The compounds PubChem CIDs 5316490, 425978, and 261578 were found to form significant interactions within the binding site of the B-cell-lymphoma-2 (BCL-2) protein. Compound 5316490, in particular, interacted with critical residues within the target protein, highlighting its potential as a therapeutic agent against lung cancer. The understanding of the molecular targets and mechanism of action of C. roseus bioactive compounds obtained from this study provides hope for improving current treatment options. In conclusion, the findings provide additional details on the evidence supporting the potential of C. roseus as a treatment for NSCLC and suggest that further research could lead to the development of innovative, potent therapies.
引用
收藏
页数:10
相关论文
共 39 条
[1]   Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management [J].
Agu, P. C. ;
Afiukwa, C. A. ;
Orji, O. U. ;
Ezeh, E. M. ;
Ofoke, I. H. ;
Ogbu, C. O. ;
Ugwuja, E. I. ;
Aja, P. M. .
SCIENTIFIC REPORTS, 2023, 13 (01)
[2]   Protein conformational flexibility modulates kinetics and thermodynamics of drug binding [J].
Amaral, M. ;
Kokh, D. B. ;
Bomke, J. ;
Wegener, A. ;
Buchstaller, H. P. ;
Eggenweiler, H. M. ;
Matias, P. ;
Sirrenberg, C. ;
Wade, R. C. ;
Frech, M. .
NATURE COMMUNICATIONS, 2017, 8
[3]   GPCRs in Cancer: Protease-Activated Receptors, Endocytic Adaptors and Signaling [J].
Arakaki, Aleena K. S. ;
Pan, Wen-An ;
Trejo, JoAnn .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2018, 19 (07)
[4]   Factors affecting drug absorption and distribution [J].
Bertram-Ralph, Elliott ;
Amare, Muataz .
ANAESTHESIA AND INTENSIVE CARE MEDICINE, 2023, 24 (04) :221-227
[5]   RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences [J].
Burley, Stephen K. ;
Bhikadiya, Charmi ;
Bi, Chunxiao ;
Bittrich, Sebastian ;
Chen, Li ;
Crichlow, Gregg, V ;
Christie, Cole H. ;
Dalenberg, Kenneth ;
Di Costanzo, Luigi ;
Duarte, Jose M. ;
Dutta, Shuchismita ;
Feng, Zukang ;
Ganesan, Sai ;
Goodsell, David S. ;
Ghosh, Sutapa ;
Green, Rachel Kramer ;
Guranovic, Vladimir ;
Guzenko, Dmytro ;
Hudson, Brian P. ;
Lawson, Catherine L. ;
Liang, Yuhe ;
Lowe, Robert ;
Namkoong, Harry ;
Peisach, Ezra ;
Persikova, Irina ;
Randle, Chris ;
Rose, Alexander ;
Rose, Yana ;
Sali, Andrej ;
Segura, Joan ;
Sekharan, Monica ;
Shao, Chenghua ;
Tao, Yi-Ping ;
Voigt, Maria ;
Westbrook, John D. ;
Young, Jasmine Y. ;
Zardecki, Christine ;
Zhuravleva, Marina .
NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) :D437-D451
[6]  
Capatina AL, 2022, REV PHYSIOL BIOCH P, V183, P1, DOI 10.1007/112_2020_46
[7]   The BCL-2 Inhibitor Venetoclax Augments Immune Effector Function Mediated by Fas Ligand, TRAIL, and Perforin/Granzyme B, Resulting in Reduced Plasma Viremia and Decreased HIV Reservoir Size during Acute HIV Infection in a Humanized Mouse Model [J].
Chandrasekar, Aswath P. P. ;
Cummins, Nathan W. W. ;
Natesampillai, Sekar ;
Misra, Anisha ;
Alto, Alecia ;
Laird, Greg ;
Badley, Andrew D. D. .
JOURNAL OF VIROLOGY, 2022, 96 (24)
[8]   An Insight into GPCR and G-Proteins as Cancer Drivers [J].
Chaudhary, Preeti Kumari ;
Kim, Soochong .
CELLS, 2021, 10 (12)
[9]   Bcl-2 promotes invasion and lung metastasis by inducing matrix metalloproteinase-2 [J].
Choi, J ;
Choi, K ;
Benveniste, EN ;
Hong, YS ;
Lee, JH ;
Kim, J ;
Park, K .
CANCER RESEARCH, 2005, 65 (13) :5554-5560
[10]   Swiss Target Prediction: updated data and new features for efficient prediction of protein targets of small molecules [J].
Daina, Antoine ;
Michielin, Olivier ;
Zoete, Vincent .
NUCLEIC ACIDS RESEARCH, 2019, 47 (W1) :W357-W364