Biophysical ordering transitions underlie genome 3D re-organization during cricket spermiogenesis

被引:2
|
作者
Orsi, Guillermo A. [1 ]
Tortora, Maxime M. C. [2 ,6 ]
Horard, Beatrice [2 ]
Baas, Dominique [3 ]
Kleman, Jean-Philippe [4 ]
Bucevicius, Jonas [5 ]
Lukinavicius, Grazvydas [5 ]
Jost, Daniel [2 ]
Loppin, Benjamin [2 ]
机构
[1] Univ Grenoble Alpes, Inst Adv Biosci, Inserm U 1209, CNRS UMR 5309, F-38000 Grenoble, France
[2] Univ Claude Bernard Lyon 1, Ecole Normale Super Lyon, Lab Biol & Modelisat Cellule, CNRS UMR5239,Inserm U1293, Lyon, France
[3] Univ Claude Bernard Lyon 1, Inst NeuroMyoGene, Lab MeLiS, Inserm U 1314,CNRS UMR 52684, F-52684 Lyon, France
[4] Univ Grenoble Alpes, Inst Biol Structurale, UMR5075, CEA,CNRS, Grenoble, France
[5] Max Planck Inst Multidisciplinary Sci, Dept NanoBiophoton, Chromatin Labeling & Imaging Grp, Gottingen, Germany
[6] Univ Southern Calif, Dept Quantitat & Computat Biol, Los Angeles, CA USA
关键词
MOLECULAR-DYNAMICS SIMULATIONS; NUCLEAR-ENVELOPE; DNA CONDENSATION; SPERM MORPHOLOGY; PHASE-SEPARATION; HISTONE H4; IN-VIVO; CHROMATIN; ORGANIZATION; ACETYLATION;
D O I
10.1038/s41467-023-39908-1
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Spermiogenesis is a radical process of differentiation whereby sperm cells acquire a compact and specialized morphology to cope with the constraints of sexual reproduction while preserving their main cargo, an intact copy of the paternal genome. In animals, this often involves the replacement of most histones by sperm-specific nuclear basic proteins (SNBPs). Yet, how the SNBP-structured genome achieves compaction and accommodates shaping remain largely unknown. Here, we exploit confocal, electron and super-resolution microscopy, coupled with polymer modeling to identify the higher-order architecture of sperm chromatin in the needle-shaped nucleus of theemerging model cricket Gryllus bimaculatus. Accompanying spermatid differentiation, the SNBP-based genome is strikingly reorganized as similar to 25nm-thick fibers orderly coiled along the elongated nucleus axis. This chromatin spool is further found to achieve large-scale helical twisting in the final stages of spermiogenesis, favoring its ultracompaction. We reveal that these dramatic transitions may be recapitulated by a surprisingly simple biophysical principle based on a nucleated rigidification of chromatin linked to the histone-to-SNBP transition within a confined nuclear space. Our work highlights a unique, liquid crystal like mode of higher-order genome organization in ultracompact cricket sperm, and establishes a multidisciplinary methodological framework to explore the diversity of non-canonical modes of DNA organization.
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页数:16
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