Next-generation sequencing analysis of the molecular spectrum of thalassemia in Southern Jiangxi, China

被引:7
作者
Yang, Tong [1 ,2 ]
Luo, Xuemei [3 ]
Liu, Yanqiu [4 ]
Lin, Min [5 ]
Zhao, Qinfei [2 ]
Zhang, Wenqian [6 ,7 ]
Chen, Zhigang [6 ,7 ]
Dong, Minghua [8 ]
Wang, Junli [9 ]
Wang, Qi [1 ]
Zhang, Xiaokang [8 ]
Zhong, Tianyu [1 ,2 ]
机构
[1] Gannan Med Univ, Sch Clin Med 1, Ganzhou, Peoples R China
[2] Gannan Med Univ, Affiliated Hosp 1, Lab Med, Ganzhou 341000, Jiangxi, Peoples R China
[3] Ganzhou Municipal Hlth Commiss, Ganzhou, Peoples R China
[4] Jiangxi Maternal & Child Hlth Hosp, Dept Med Genet, Nanchang, Peoples R China
[5] Hanshan Normal Univ, Sch Food Engn & Biotechnol, Chaozhou, Peoples R China
[6] BGI Shenzhen, BGI Genom, Shenzhen, Peoples R China
[7] BGI Shenzhen, BGI Wuhan Clin Labs, Wuhan, Peoples R China
[8] Gannan Med Univ, Sch Publ Hlth & Hlth Management, Ganzhou, Peoples R China
[9] Youjiang Med Univ Nationalities, Affiliated Hosp, Baise, Peoples R China
关键词
Next-generation sequencing; Thalassemia; Molecular spectrum; China; ZHUANG AUTONOMOUS REGION; HEMOGLOBIN DISORDERS; POPULATION; DIAGNOSIS;
D O I
10.1186/s40246-023-00520-5
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
BackgroundThalassemia is an extremely prevalent monogenic inherited blood disorder in southern China. It is important to comprehensively understand the molecular spectrum of thalassemia in an area with such a high prevalence of thalassemia before taking appropriate actions for the prevention and treatment of this disorder. Herein, we explored the clinical feasibility of using next-generation sequencing (NGS) for large-scale population screening to illustrate the prevalence and spectrum of thalassemia in Southern Jiangxi.MethodsBlood samples collected from 136,312 residents of reproductive age in Southern Jiangxi were characterized for thalassemia by NGS. A retrospective analysis was then conducted on blood samples determined to be positive for thalassemia.ResultsIn total, 19,827 (14.545%) subjects were diagnosed as thalassemia carriers, and the thalassemia prevalence rate significantly varied by geographical region (p < 0.001). A total of 40 & alpha;-thalassemia genotypes including 21 rare genotypes were identified, with -@-(SEA)/& alpha;& alpha; being the most prevalent genotype. 42 & beta;-thalassemia genotypes including 27 rare genotypes were identified, with the most common mutation IVS II-654 C > T accounting for 35.257% of these & beta;-thalassemia genotypes. Furthermore, 74 genotypes were identified among 608 individuals with combined & alpha;- and & beta;-thalassemia. Notably, most individuals with rare thalassemia mutations had mildly abnormal hematologic parameters including microcytic hypochromia.ConclusionsOur findings demonstrate the great heterogeneity and diverse spectrum of thalassemia in Southern Jiangxi, emphasizing the importance and necessity of persistent prevention and control of thalassemia in this region. Additionally, our findings further suggest that NGS can effectively identify rare mutations and reduce the misdiagnosis rate of thalassemia.
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页数:12
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