Small molecules in regulating protein phase separation

被引:13
作者
Li, Siyang [1 ]
Wang, Yanyan [2 ]
Lai, Luhua [1 ,2 ]
机构
[1] Peking Univ, Acad Adv Interdisciplinary Studies, Ctr Quantitat Biol, Beijing 100871, Peoples R China
[2] Peking Univ, Coll Chem & Mol Engn, Peking Tsinghua Ctr Life Sci, BNLMS, Beijing 100871, Peoples R China
基金
中国国家自然科学基金;
关键词
condensate; liquid-liquid phase separation; liquid-to-solid phase transition; small molecule; 1,6-hexanediol; REPEAT EXPANSION; HEXANUCLEOTIDE REPEAT; C9ORF72; TRANSITIONS; PERMEABILITY; AGGREGATION; COMPLEXES; SYNUCLEIN; GRANULES;
D O I
10.3724/abbs.2023106
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Biomolecular condensates formed by phase separation are involved in many cellular processes. Dysfunctional or abnormal condensates are closely associated with neurodegenerative diseases, cancer and other diseases. Small molecules can effectively regulate protein phase separation by modulating the formation, dissociation, size and material properties of condensates. Discovery of small molecules to regulate protein phase separation provides chemical probes for deciphering the underlying mechanism and potential novel treatments for condensate-related diseases. Here we review the advances of small molecule regulation of phase separation. The discovery, chemical structures of recently found small molecule phase separation regulators and how they modulate biological condensates are summarized and discussed. Possible strategies to accelerate the discovery of more liquid-liquid phase separation (LLPS)-regulating small molecules are proposed.
引用
收藏
页码:1075 / 1083
页数:9
相关论文
共 88 条
  • [11] Transcription Factors Activate Genes through the Phase-Separation Capacity of Their Activation Domains
    Boija, Ann
    Klein, Isaac A.
    Sabari, Benjamin R.
    Dall'Agnese, Alessandra
    Coffey, Eliot L.
    Zamudio, Alicia V.
    Li, Charles H.
    Shrinivas, Krishna
    Manteiga, John C.
    Hannett, Nancy M.
    Abraham, Brian J.
    Afeyan, Lena K.
    Guo, Yang E.
    Rimel, Jenna K.
    Fant, Charli B.
    Schuijers, Jurian
    Lee, Tong Ihn
    Taatjes, Dylan J.
    Young, Richard A.
    [J]. CELL, 2018, 175 (07) : 1842 - +
  • [12] Regulatory mechanisms of tau protein fibrillation under the conditions of liquid-liquid phase separation
    Boyko, Solomiia
    Surewicz, Krystyna
    Surewicz, Witold K.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (50) : 31882 - 31890
  • [13] Liquid-liquid phase separation of tau protein: The crucial role of electrostatic interactions
    Boyko, Solomiia
    Qi, Xu
    Chen, Tien-Hao
    Surewicz, Krystyna
    Surewicz, Witold K.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2019, 294 (29) : 11054 - 11059
  • [14] Germline P Granules Are Liquid Droplets That Localize by Controlled Dissolution/Condensation
    Brangwynne, Clifford P.
    Eckmann, Christian R.
    Courson, David S.
    Rybarska, Agata
    Hoege, Carsten
    Gharakhani, Joebin
    Juelicher, Frank
    Hyman, Anthony A.
    [J]. SCIENCE, 2009, 324 (5935) : 1729 - 1732
  • [15] Inhibition and disaggregation of α-synuclein oligomers by natural polyphenolic compounds
    Caruana, Mario
    Hoegen, Tobias
    Levin, Johannes
    Hillmer, Andreas
    Giese, Armin
    Vassallo, Neville
    [J]. FEBS LETTERS, 2011, 585 (08) : 1113 - 1120
  • [16] Next-Generation Drugs and Probes for Chromatin Biology: From Targeted Protein Degradation to Phase Separation
    Cermakova, Katerina
    Hodges, H. Courtney
    [J]. MOLECULES, 2018, 23 (08):
  • [17] Phase Separation Mediates NUP98 Fusion Oncoprotein Leukemic Transformation
    Chandra, Bappaditya
    Michmerhuizen, Nicole L.
    Shirnekhi, Hazheen K.
    Tripathi, Swarnendu
    Pioso, Brittany J.
    Baggett, David W.
    Mitrea, Diana M.
    Iacobucci, Ilaria
    White, Michael R.
    Chen, Jingjing
    Park, Cheon-Gil
    Wu, Huiyun
    Pounds, Stanley
    Medyukhina, Anna
    Khairy, Khaled
    Gao, Qingsong
    Qu, Chunxu
    Abdelhamed, Sherif
    Gorman, Scott D.
    Bawa, Simranjot
    Maslanka, Carolyn
    Kinger, Swati
    Dogra, Priyanka
    Ferrolino, Mylene C.
    Di Giacomo, Danika
    Mecucci, Cristina
    Klco, Jeffery M.
    Mullighan, Charles G.
    Kriwacki, Richard W.
    [J]. CANCER DISCOVERY, 2022, 12 (04) : 1152 - 1169
  • [18] Allosteric inhibition of SHP2 phosphatase inhibits cancers driven by receptor tyrosine kinases
    Chen, Ying-Nan P.
    LaMarche, Matthew J.
    Chan, Ho Man
    Fekkes, Peter
    Garcia-Fortanet, Jorge
    Acker, Michael G.
    Antonakos, Brandon
    Chen, Christine Hiu-Tung
    Chen, Zhouliang
    Cooke, Vesselina G.
    Dobson, Jason R.
    Deng, Zhan
    Fei, Feng
    Firestone, Brant
    Fodor, Michelle
    Fridrich, Cary
    Gao, Hui
    Grunenfelder, Denise
    Hao, Huai-Xiang
    Jacob, Jaison
    Ho, Samuel
    Hsiao, Kathy
    Kang, Zhao B.
    Karki, Rajesh
    Kato, Mitsunori
    Larrow, Jay
    La Bonte, Laura R.
    Lenoir, Francois
    Liu, Gang
    Liu, Shumei
    Majumdar, Dyuti
    Meyer, Matthew J.
    Palermo, Mark
    Perez, Lawrence
    Pu, Minying
    Price, Edmund
    Quinn, Christopher
    Shakya, Subarna
    Shultz, Michael D.
    Slisz, Joanna
    Venkatesan, Kavitha
    Wang, Ping
    Warmuth, Markus
    Williams, Sarah
    Yang, Guizhi
    Yuan, Jing
    Zhang, Ji-Hu
    Zhu, Ping
    Ramsey, Timothy
    Keen, Nicholas J.
    [J]. NATURE, 2016, 535 (7610) : 148 - +
  • [19] A Chemical Chaperone Decouples TDP-43 Disordered Domain Phase Separation from Fibrillation
    Choi, Kyoung-Jae
    Tsoi, Phoebe S.
    Moosa, Mandi Muhammad
    Paulucci-Holthauzen, Adriana
    Liao, Shih-Chu Jeff
    Ferreon, Josephine C.
    Ferreon, Allan Chris M.
    [J]. BIOCHEMISTRY, 2018, 57 (50) : 6822 - 6826
  • [20] Myricetin slows liquid-liquid phase separation of Tau and activates ATG5-dependent autophagy to suppress Tau toxicity
    Dai, Bin
    Zhong, Tao
    Chen, Zhi-Xian
    Chen, Wang
    Zhang, Na
    Liu, Xiao-Ling
    Wang, Li-Qiang
    Chen, Jie
    Liang, Yi
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2021, 297 (04)