Development of a candidate multi-epitope vaccine against Sphingobacterium spiritivorum Reverse vaccinology and immunoinformatics approach

被引:1
|
作者
Alamri, Mubarak A. [1 ]
机构
[1] Prince Sattam Bin Abdulaziz Univ, Coll Pharm, Dept Pharmaceut Chem, Al Kharj, Saudi Arabia
关键词
Sphingobacterium spiritivorum; chimeric vaccine; conformational B-cell epitopes; molecular docking; binding free energies calculation; WEB SERVER; STRUCTURE REFINEMENT; STRUCTURE PREDICTION; PROTEIN; DESIGN; BACTEREMIA;
D O I
10.15537/smj.2023.44.6.20220733
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Objectives: To develop a candidate vaccine aginst the Sphingobacterium spiritivorum.Methods: Since there is currently no vaccine against this pathogen, we employed in-silico methods to extensively explore the outer membrane toxin -producing proteins found specifically in S. spiritivorum to forecast a multi-epitope chimeric vaccine design. This computational study was conducted in Saudi Arabia in 2022 (study design: computational; ethical approval not applicable).Results: TThe vaccine peptide comprises multiple linear and conformational B-cell epitopes, which have the potential to elicit humoral immunity. Projected B -cell-derived T-cell epitopes for outer membrane proteins are present in the produced protein. The docking and molecular dynamic simulation results indicating that the chimeric vaccine had adequate binding stability with TLR-4. Following the immunological simulation, significant levels of immune cell expression were observed as immunoglobulin (Ig) M and IgG, IgM, IgM1, and IgM2, and independently IgG1 and IgG2.Conclusion: The developed vaccine candidate is suitable for further testing and can assist experimental vaccinologists in developing an effective vaccine against S. spiritivorum.
引用
收藏
页码:544 / 559
页数:16
相关论文
共 50 条
  • [1] Designing a T cell multi-epitope vaccine against hRSV with reverse vaccinology: An immunoinformatics approach
    Guan, Peibin
    Qi, Congyan
    Xu, Guojin
    Sheng, Can
    Sun, Siqi
    Zhou, Zhicheng
    Jia, Shulei
    COLLOIDS AND SURFACES B-BIOINTERFACES, 2025, 251
  • [2] Designing a multi-epitope vaccine candidate against pandemic influenza a virus: an immunoinformatics and structural vaccinology approach
    Samantaray, Mahesh
    Pushan, Shilpa Sri
    Rajagopalan, Muthukumaran
    Abrol, Kajal
    Basumatari, Jayarani
    Murthy, T. P. Krishna
    Ramaswamy, Amutha
    MOLECULAR DIVERSITY, 2025,
  • [3] In silico designing of a multi-epitope vaccine against Burkholderia pseudomallei: reverse vaccinology and immunoinformatics
    Shahab, Muhammad
    Hayat, Chandni
    Sikandar, Ramin
    Zheng, Guojun
    Akter, Shahina
    JOURNAL OF GENETIC ENGINEERING AND BIOTECHNOLOGY, 2022, 20 (01)
  • [4] Designing an efficient multi-epitope vaccine against Campylobacter jejuni using immunoinformatics and reverse vaccinology approach
    Gupta, Nayan
    Kumar, Ajay
    MICROBIAL PATHOGENESIS, 2020, 147
  • [5] In silico designing of a multi-epitope vaccine against Burkholderia pseudomallei: reverse vaccinology and immunoinformatics
    Muhammad Shahab
    Chandni Hayat
    Ramin Sikandar
    Guojun Zheng
    Shahina Akter
    Journal of Genetic Engineering and Biotechnology, 20
  • [6] Development of multi-epitope mRNA vaccine against Clostridioides difficile using reverse vaccinology and immunoinformatics approaches
    Tan, Caixia
    Xiao, Yuanyuan
    Liu, Ting
    Chen, Siyao
    Zhou, Juan
    Zhang, Sisi
    Hu, Yiran
    Wu, Anhua
    Li, Chunhui
    SYNTHETIC AND SYSTEMS BIOTECHNOLOGY, 2024, 9 (04) : 667 - 683
  • [7] Reverse vaccinology and immunoinformatics approaches to design multi-epitope based vaccine against oncogenic KRAS
    Ramalingam, Prasanna Srinivasan
    Arumugam, Sivakumar
    MEDICAL ONCOLOGY, 2023, 40 (10)
  • [8] Reverse vaccinology and immunoinformatics approaches to design multi-epitope based vaccine against oncogenic KRAS
    Prasanna Srinivasan Ramalingam
    Sivakumar Arumugam
    Medical Oncology, 40
  • [9] Designing a multi-epitope vaccine against Pseudomonas aeruginosa via integrating reverse vaccinology with immunoinformatics approaches
    Zhu, Fei
    Qin, Rongliu
    Ma, Shiyang
    Zhou, Ziyou
    Tan, Caixia
    Yang, Hang
    Zhang, Peipei
    Xu, Yizhong
    Luo, Yuying
    Chen, Jie
    Pan, Pinhua
    SCIENTIFIC REPORTS, 2025, 15 (01):
  • [10] Design of a multi-epitope vaccine against six Nocardia species based on reverse vaccinology combined with immunoinformatics
    Zhu, Fei
    Tan, Caixia
    Li, Chunhui
    Ma, Shiyang
    Wen, Haicheng
    Yang, Hang
    Rao, Mingjun
    Zhang, Peipei
    Peng, Wenzhong
    Cui, Yanhui
    Chen, Jie
    Pan, Pinhua
    FRONTIERS IN IMMUNOLOGY, 2023, 14