Iterated cross validation method for prediction of survival in diffuse large B-cell lymphoma for small size dataset

被引:10
作者
Chang, Chin-Chuan [1 ,2 ,3 ]
Chen, Chien-Hua [1 ,4 ]
Hsieh, Jer-Guang [1 ]
Jeng, Jyh-Horng [5 ]
机构
[1] I Shou Univ, Dept Elect Engn, Kaohsiung 84001, Taiwan
[2] Kaohsiung Med Univ Hosp, Dept Nucl Med, Kaohsiung 80756, Taiwan
[3] Kaohsiung Med Univ, Coll Med, Sch Med, Kaohsiung 80756, Taiwan
[4] Kaohsiung Municipal United Hosp, Dept Emergency Med, Kaohsiung 80457, Taiwan
[5] I Shou Univ, Dept Informat Engn, Kaohsiung 84001, Taiwan
关键词
METABOLIC TUMOR VOLUME; POSITRON-EMISSION-TOMOGRAPHY; PROGRESSION-FREE SURVIVAL; PROGNOSTIC-SIGNIFICANCE; OUTCOME PREDICTION; F-18-FDG PET/CT; FDG-PET/CT; CLASSIFICATION; RITUXIMAB; DIAGNOSIS;
D O I
10.1038/s41598-023-28394-6
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Efforts have been made to improve the risk stratification model for patients with diffuse large B-cell lymphoma (DLBCL). This study aimed to evaluate the disease prognosis using machine learning models with iterated cross validation (CV) method. A total of 122 patients with pathologically confirmed DLBCL and receiving rituximab-containing chemotherapy were enrolled. Contributions of clinical, laboratory, and metabolic imaging parameters from fluorine-18 fluorodeoxyglucose (FDG) positron emission tomography/computed tomography (PET/CT) scans to the prognosis were evaluated using five regression models, namely logistic regression, random forest, support vector classifier (SVC), deep neural network (DNN), and fuzzy neural network models. Binary classification predictions for 3-year progression free survival (PFS) and 3-year overall survival (OS) were conducted. The 10-iterated fivefold CV with shuffling process was conducted to predict the capability of learning machines. The median PFS and OS were 41.0 and 43.6 months, respectively. Two indicators were found to be independent predictors for prognosis: international prognostic index and total metabolic tumor volume (MTVsum) from FDG PET/CT. For PFS, SVC and DNN (both with accuracy 71%) have the best predictive results, of which outperformed other algorithms. For OS, the DNN has the best predictive result (accuracy 76%). Using clinical and metabolic parameters as input variables, the machine learning methods with iterated CV method add the predictive values for PFS and OS evaluation in DLBCL patients.
引用
收藏
页数:10
相关论文
共 49 条
[1]   Evaluation of Prognosis in Nasopharyngeal Cancer Using Machine Learning [J].
Akcay, Melek ;
Etiz, Durmus ;
Celik, Ozer ;
Ozen, Alaattin .
TECHNOLOGY IN CANCER RESEARCH & TREATMENT, 2020, 19
[2]   Multiple fuzzy neural network system for outcome prediction and classification of 220 lymphoma patients on the basis of molecular profiling [J].
Ando, T ;
Suguro, M ;
Kobayashi, T ;
Seto, M ;
Honda, H .
CANCER SCIENCE, 2003, 94 (10) :906-913
[3]   Fuzzy neural network applied to gene expression profiling for predicting the prognosis of diffuse large B-cell lymphoma [J].
Ando, T ;
Suguro, M ;
Hanai, T ;
Kobayashi, T ;
Honda, H ;
Seto, M .
JAPANESE JOURNAL OF CANCER RESEARCH, 2002, 93 (11) :1207-1212
[4]   In Newly Diagnosed Diffuse Large B-Cell Lymphoma, Determination of Bone Marrow Involvement with 18F-FDG PET/CT Provides Better Diagnostic Performance and Prognostic Stratification Than Does Biopsy [J].
Berthet, Louis ;
Cochet, Alexandre ;
Kanoun, Salim ;
Berriolo-Riedinger, Alina ;
Humbert, Olivier ;
Toubeau, Michel ;
Dygai-Cochet, Inna ;
Legouge, Caroline ;
Casasnovas, Olivier ;
Brunotte, Francois .
JOURNAL OF NUCLEAR MEDICINE, 2013, 54 (08) :1244-1250
[5]   Optimizing Outcome Prediction in Diffuse Large B-Cell Lymphoma by Use of Machine Learning and Nationwide Lymphoma Registries: A Nordic Lymphoma Group Study [J].
Biccler, Jorne L. ;
Eloranta, Sandra ;
Brown, Peter de Nully ;
Frederikseri, Henrik ;
Jerkeman, Mats ;
Jorgensen, Judit ;
Jakobsen, Lasso Hjort ;
Smedby, Karin E. ;
Bogsted, Martin ;
El-Galaly, Tarec C. .
JCO CLINICAL CANCER INFORMATICS, 2018, 2 :1-13
[6]   Utility of baseline 18FDG-PET/CT functional parameters in defining prognosis of primary mediastinal (thymic) large B-cell lymphoma [J].
Ceriani, Luca ;
Martelli, Maurizio ;
Zinzani, Pier Luigi ;
Ferreri, Andres J. M. ;
Botto, Barbara ;
Stelitano, Caterina ;
Gotti, Manuel ;
Cabras, Maria Giuseppina ;
Rigacci, Luigi ;
Gargantini, Livio ;
Merli, Francesco ;
Pinotti, Graziella ;
Mannina, Donato ;
Luminari, Stefano ;
Stathis, Anastasios ;
Russo, Eleonora ;
Cavalli, Franco ;
Giovanella, Luca ;
Johnson, Peter W. M. ;
Zucca, Emanuele .
BLOOD, 2015, 126 (08) :950-956
[7]   Prognostic significance of retention index of bone marrow on dual-phase 18F-fluorodeoxyglucose positron emission tomography/computed tomography in patients with diffuse large B-cell lymphoma [J].
Chang, Chin-Chuan ;
Cho, Shih-Feng ;
Chuang, Ya-Wen ;
Lin, Chia-Yang ;
Huang, Ying-Fong ;
Tyan, Yu-Chang .
MEDICINE, 2018, 97 (02)
[8]   Prognostic significance of total metabolic tumor volume on 18F-fluorodeoxyglucose positron emission tomography/computed tomography in patients with diffuse large B-cell lymphoma receiving rituximab-containing chemotherapy [J].
Chang, Chin-Chuan ;
Cho, Shih-Feng ;
Chuang, Ya-Wen ;
Lin, Chia-Yang ;
Chang, Shu-Min ;
Hsu, Wen-Ling ;
Huang, Ying-Fong .
ONCOTARGET, 2017, 8 (59) :99587-99600
[9]   High maximum standard uptake value (SUVmax) on PET scan is associated with shorter survival in patients with diffuse large B cell lymphoma [J].
Chihara, Dai ;
Oki, Yasuhiro ;
Onoda, Hiroshi ;
Taji, Hirofumi ;
Yamamoto, Kazuhito ;
Tamaki, Tsuneo ;
Morishima, Yasuo .
INTERNATIONAL JOURNAL OF HEMATOLOGY, 2011, 93 (04) :502-508
[10]   Utilization of 18F-FDG PET/CT as a staging tool in patients with newly diagnosed lymphoma [J].
Cho, Shih-Feng ;
Chang, Chin-Chuan ;
Liu, Yi-Chang ;
Chang, Chao-Sung ;
Hsiao, Hui-Hua ;
Liu, Ta-Chih ;
Huang, Chiung-Tang ;
Lin, Sheng-Fung .
KAOHSIUNG JOURNAL OF MEDICAL SCIENCES, 2015, 31 (03) :130-137