Genetic diversity of mitochondrial DNA D-loop in wild and domestic pigs (Sus scrofa) in East Asia

被引：0
|
作者：
Niu, LiLi [1 ]
Xie, Jingjing [1 ]
Shi, Keyu [1 ]
Zhong, Tao [1 ]
机构：
[1] Sichuan Agr Univ, Coll Anim Sci & Technol, Farm Anim Genet Resources Explorat & Innovat Key, Chengdu 611130, Peoples R China
来源：
FOLIA BIOLOGICA-KRAKOW | 2023年 / 71卷 / 01期
关键词：
mitochondrial DNA; wild boar; domestic pig; genetic diversity; geophylogeny; BOAR; MULTIPLE; LEUCOMYSTAX; DIVERGENCE; REVEALS; REGION; BREEDS; ISLAND;
D O I：
10.3409/fb_71-1.05
中图分类号：
Q [生物科学];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
Chinese domestic pig breeds have abundant genetic resources, but definite information about the geogra-phic specificity and genetic structure is lacking. In this study, we analysed 359 mitochondrial D-loop sequ-ences, including 86 sequences from Chinese domestic pigs and the rest downloaded from GenBank. The haplotype and nucleotide diversity indices ranged from 0.467 +/- 0.132 (Duroc) to 1.000 +/- 0.500 (Thailand, North Korea and Cambodia) and 0.00067 +/- 0.00019 (Duroc) to 0.02000 +/- 0.01000 (Thailand), respectively. The neighbour-joining tree revealed two clads in the individual pigs, with a Chinese domestic breed distri-buted discontinuously among several breeds. The network data indicated that the gene pools of Chinese domestic pigs are likely related to Chinese, Japanese and some other Southeast Asian wild boars.
引用
收藏
页码：37 / 44
页数：8
相关论文
共 50 条
  • [1] Genetic diversity in wild (Sus scrofa scrofa) and domestic (Sus scrofa domestica) pigs and their hybrids based on polymorphism of a fragment of the D-loop region in the mitochondrial DNA
    Grossi, S. F.
    Lui, J. F.
    Garcia, J. E.
    Meirelles, F. V.
    GENETICS AND MOLECULAR RESEARCH, 2006, 5 (04) : 564 - 568
  • [2] Genetic diversity in the mitochondrial DNA D-loop region of global swine (Sus scrofa) populations
    Zhang, Junxia
    Jiao, Ting
    Zhao, Shengguo
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2016, 473 (04) : 814 - 820
  • [3] The robust phylogeny of Korean wild boar (Sus scrofa coreanus) using partial D-loop sequence of mtDNA
    Cho, In-Cheol
    Han, Sang-Hyun
    Fang, Meiying
    Lee, Sung-Soo
    Ko, Moon-Suck
    Lee, Hang
    Lim, Hyun-Tae
    Yoo, Chae-Kyoung
    Lee, Jun-Heon
    Jeon, Jin-Tae
    MOLECULES AND CELLS, 2009, 28 (05) : 423 - 430
  • [4] Mitochondrial DNA D-loop haplogroup contributions to the genetic diversity of East European domestic chickens from Russia
    Dyomin, A. G.
    Danilova, M. I.
    Mwacharo, J. M.
    Masharsky, A. E.
    Panteleev, A. V.
    Druzhkova, A. S.
    Trifonov, V. A.
    Galkina, S. A.
    JOURNAL OF ANIMAL BREEDING AND GENETICS, 2017, 134 (02) : 98 - 108
  • [5] Novel coding genetic variants of the GBP1 gene in wild and domestic pigs (Sus scrofa)
    Chen, Shanyuan
    Gomes, Rui
    Costa, Vania
    Rocha, Isabel
    Zsolnai, Attila
    Anton, Istvan
    Charneca, Rui
    Santos, Pedro
    Nunes, Jose Luis
    Buzgo, Jozsef
    Varga, Gyula
    Zhang, Ya-ping
    Beja-Pereira, Albano
    LIVESTOCK SCIENCE, 2012, 146 (01) : 1 - 4
  • [6] Genetic diversity of the Central European wild boar (Sus scrofa scrofa) population and domestic pig (Sus scrofa domesticus) breeds based on a microsatellite DNA locus
    Snegin, E. A.
    Makeeva, V. M.
    Kaledin, A. P.
    Ostapchuk, A. M.
    Alazneli, I. D.
    Smurov, A., V
    VAVILOVSKII ZHURNAL GENETIKI I SELEKTSII, 2021, 25 (08): : 822 - 830
  • [7] Investigation of the diversity and origins of Chinese dairy goats via the mitochondrial DNA D-loop
    Wang, G. Z.
    Pi, X. S.
    Ji, Z. B.
    Qin, Z. J.
    Hou, L.
    Chao, T. L.
    Wang, J. M.
    JOURNAL OF ANIMAL SCIENCE, 2015, 93 (03) : 949 - 955
  • [8] Genetic structure of wild boar (Sus scrofa) populations from East Asia based on microsatellite loci analyses
    Choi, Sung Kyoung
    Lee, Ji-Eun
    Kim, Young-Jun
    Min, Mi-Sook
    Voloshina, Inna
    Myslenkov, Alexander
    Oh, Jang Geun
    Kim, Tae-Hun
    Markov, Nickolay
    Seryodkin, Ivan
    Ishiguro, Naotaka
    Yu, Li
    Zhang, Ya-Ping
    Lee, Hang
    Kim, Kyung Seok
    BMC GENETICS, 2014, 15
  • [9] Genetic Diversity Analysis of Mitochondrial DNA D-loop Region of Sable in China
    Xu Chun-zhu
    Zhang Hong-hai
    Ma Jian-zhang
    ISBE 2011: 2011 INTERNATIONAL CONFERENCE ON BIOMEDICINE AND ENGINEERING, VOL 2, 2011, : 408 - 412
  • [10] GENETIC DIVERSITY OF KEJOBONG GOAT BASED ON MITOCHONDRIAL DNA D-LOOP SEQUENCE
    Harlistyo, M. F.
    Sutopo
    Kurnianto, E.
    JOURNAL OF THE INDONESIAN TROPICAL ANIMAL AGRICULTURE, 2014, 39 (04) : 204 - 209
12345