A survey of feature detection methods for localisation of plain sections of axial brain magnetic resonance imaging

被引:1
作者
Martinu, Jiri [1 ]
Novotny, Jan [2 ]
Adamek, Karel [2 ,3 ]
Cermak, Petr [1 ,2 ]
Kozel, Jiri [4 ]
Skoloudik, David [4 ]
机构
[1] Silesian Univ Opava, Inst Comp Sci, Opava, Czech Republic
[2] Silesian Univ Opava, Inst Phys, Res Ctr Theoret Phys & Astrophys, Opava, Czech Republic
[3] Univ Oxford, Oxford e Res Ctr, Dept Engn Sci, Oxford, England
[4] Ostrava Univ, Ctr Hlth Res, Med Fac, Ostrava, Czech Republic
关键词
Image processing; Medical imaging; Magnetic resonance imaging; Computer visions; Feature detection; FEATURE-EXTRACTION;
D O I
10.1016/j.bspc.2023.104611
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Matching MRI brain images between patients or mapping patients' MRI slices to the simulated atlas of a brain is key to the automatic registration of MRI of a brain. The ability to match MRI images would also enable such applications as indexing and searching MRI images among multiple patients or selecting images from the region of interest. In this work, we have introduced robustness, accuracy and cumulative distance metrics and methodology that allows us to compare different techniques and approaches in matching brain MRI of different patients or matching MRI brain slice to a position in the brain atlas. To that end, we have used feature detection methods AGAST, AKAZE, BRISK, GFTT, HardNet, and ORB, which are established methods in image processing, and compared them on their resistance to image degradation and their ability to match the same brain MRI slice of different patients. We have demonstrated that some of these techniques can correctly match most of the brain MRI slices of different patients. When matching is performed with the atlas of the human brain, their performance is significantly lower. The best performing feature detection method was a combination of SIFT detector and HardNet descriptor that achieved 93% accuracy in matching images with other patients and only 52% accurately matched images when compared to atlas.
引用
收藏
页数:15
相关论文
共 32 条
[1]   FUNCTIONAL CONNECTIVITY IN THE MOTOR CORTEX OF RESTING HUMAN BRAIN USING ECHO-PLANAR MRI [J].
BISWAL, B ;
YETKIN, FZ ;
HAUGHTON, VM ;
HYDE, JS .
MAGNETIC RESONANCE IN MEDICINE, 1995, 34 (04) :537-541
[2]  
Bojanic D, 2019, INT SYMP IMAGE SIG, P64, DOI 10.1109/ISPA.2019.8868792
[3]   CEREBRUM: a fast and fully-volumetric Convolutional Encoder-decodeR for weakly-supervised sEgmentation of BRain strUctures from out-of-the-scanner MRI [J].
Bontempi, Dennis ;
Benini, Sergio ;
Signoroni, Alberto ;
Svanera, Michele ;
Muckli, Lars .
MEDICAL IMAGE ANALYSIS, 2020, 62
[4]  
Bradski G, 2000, DR DOBBS J, V25, P120
[5]   Segmentation and Feature Extraction in Medical Imaging: A Systematic Review [J].
Chowdhary, Chiranji Lal ;
Acharjya, D. P. .
INTERNATIONAL CONFERENCE ON COMPUTATIONAL INTELLIGENCE AND DATA SCIENCE, 2020, 167 :26-36
[6]  
Cocosco C.A., 1997, Brainweb: Online interface to a 3d mri simulated brain database
[7]   AUTOMATIC 3D INTERSUBJECT REGISTRATION OF MR VOLUMETRIC DATA IN STANDARDIZED TALAIRACH SPACE [J].
COLLINS, DL ;
NEELIN, P ;
PETERS, TM ;
EVANS, AC .
JOURNAL OF COMPUTER ASSISTED TOMOGRAPHY, 1994, 18 (02) :192-205
[8]   Design and construction of a realistic digital brain phantom [J].
Collins, DL ;
Zijdenbos, AP ;
Kollokian, V ;
Sled, JG ;
Kabani, NJ ;
Holmes, CJ ;
Evans, AC .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 1998, 17 (03) :463-468
[9]  
Deng J., 2020, J PHYS C SERIES, V1684, P012028, DOI 10.1088/1742-6596/1684/1/012028
[10]   BEaST: Brain extraction based on nonlocal segmentation technique [J].
Eskildsen, Simon F. ;
Coupe, Pierrick ;
Fonov, Vladimir ;
Manjon, Jose V. ;
Leung, Kelvin K. ;
Guizard, Nicolas ;
Wassef, Shafik N. ;
Ostergaard, Lasse Riis ;
Collins, D. Louis .
NEUROIMAGE, 2012, 59 (03) :2362-2373