SARS-CoV-2 spike and ACE2 entanglement-like binding

被引:1
作者
Pregnolato, Massimo [1 ]
Zizzi, Paola [2 ]
机构
[1] Univ Pavia, Dept Drug Sci, Via Taramelli 12, I-27100 Pavia, Italy
[2] Univ Pavia, Dept Brain & Behav Sci, Piazza Botta 11, I-27100 Pavia, Italy
关键词
Spike protein; ACE2; Qubit; Entanglement; Quantum robots; PROTEINS;
D O I
10.1007/s42484-023-00098-0
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
We describe the binding between the glycoprotein Spike of SARS-CoV-2 and the human host cell receptor ACE2 as a quantum circuit, comprising the one-qubit Hadamard quantum logic gate performing the quantum superposition of the S-1 subunit of the Spike protein, and the two-qubit quantum logic gate CNOT, which performs maximum entanglement between the Spike-qubit S-1 and the ACE2 receptor protein. Also, we consider two strategies to prevent the binding process between the Spike-qubit -S1 and the ACE2 receptor. The first one is the use of competitive peptidomimetic inhibitors that can selectively bind to the receptor binding domain (RBD) of the Spike glycoprotein with much higher affinity than the cell surface receptor itself. These inhibitors are targeted to the CNOT quantum logic gate and will get maximally entangled with the S-1 qubit in place of the natural ACE2 receptor. The second one is to use covalent inhibitors, which will destroy S-1 by acting as a projective quantum measurement. Finally, the conjecture that S-1 is a quantum bio-robot is formulated.
引用
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页数:13
相关论文
共 38 条
[1]   Non-invasive delivery strategies for biologics [J].
Anselmo, Aaron C. ;
Gokarn, Yatin ;
Mitragotri, Samir .
NATURE REVIEWS DRUG DISCOVERY, 2019, 18 (01) :19-40
[2]   Fluctuation driven transport and models of molecular motors and pumps [J].
Astumian, RD ;
Derényi, I .
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 1998, 27 (05) :474-489
[3]   Designing Short Peptides to Block the Interaction of SARS-CoV-2 and Human ACE2 for COVID-19 Therapeutics [J].
Basit, Abdul ;
Karim, Asad Mustafa ;
Asif, Muhammad ;
Ali, Tanveer ;
Lee, Jung Hun ;
Jeon, Jeong Ho ;
Rehman, Shafiq Ur ;
Lee, Sang Hee .
FRONTIERS IN PHARMACOLOGY, 2021, 12
[4]   Quantum robots and environments [J].
Benioff, P .
PHYSICAL REVIEW A, 1998, 58 (02) :893-904
[5]  
Benioff P, 1999, ARXIV
[6]  
Breuer H.-P., 2007, The Theory of Open Quantum Systems
[7]   Keep out! SARS-CoV-2 entry inhibitors: their role and utility as COVID-19 therapeutics [J].
Chitsike, Lennox ;
Duerksen-Hughes, Penelope .
VIROLOGY JOURNAL, 2021, 18 (01)
[8]   Therapeutically effective covalent spike protein inhibitors in treatment of SARS-CoV-2 [J].
Vikram Choudhary ;
Amisha Gupta ;
Rajesh Sharma ;
Hamendra Singh Parmar .
Journal of Proteins and Proteomics, 2021, 12 (4) :257-270
[9]   Distributed entanglement [J].
Coffman, V ;
Kundu, J ;
Wootters, WK .
PHYSICAL REVIEW A, 2000, 61 (05) :5
[10]   Characterisation of the transcriptome and proteome of SARS-CoV-2 reveals a cell passage induced in-frame deletion of the furin-like cleavage site from the spike glycoprotein [J].
Davidson, Andrew D. ;
Williamson, Maia Kavanagh ;
Lewis, Sebastian ;
Shoemark, Deborah ;
Carroll, Miles W. ;
Heesom, Kate J. ;
Zambon, Maria ;
Ellis, Joanna ;
Lewis, Philip A. ;
Hiscox, Julian A. ;
Matthews, David A. .
GENOME MEDICINE, 2020, 12 (01)