A pan-cancer analysis of HAVCR1 with a focus on diagnostic, prognostic and immunological roles in human cancers

被引:0
作者
Li, Guangyao [1 ]
Javed, Muhammad [2 ]
Rasool, Rubab [3 ]
Abdel-Maksoud, Mostafa A. [4 ,9 ]
Mubarak, Ayman S. [4 ]
Studenik, Christian R. [5 ]
Narayanan, J. [6 ,10 ]
Atuahene, Sampson Agyapong [7 ,11 ]
Aufy, Mohammed [5 ]
Cao, Kun [8 ,12 ]
机构
[1] Second Peoples Hosp Wuhu, Dept Gastrointestinal Surg, Wuhu, Anhui, Peoples R China
[2] Primary & Secondary Hlth Care Dept, Lahore, Pakistan
[3] Hlth Bridge Hosp, Def Housing Author, Lahore, Pakistan
[4] King Saud Univ, Coll Sci, Bot & Microbiol Dept, Riyadh 11451, Saudi Arabia
[5] Univ Vienna, Dept Pharmaceut Sci, Div Pharmacol & Toxicol, Vienna, Austria
[6] SRMIST, SRM Coll Pharm, Chennai, India
[7] Zhejiang Normal Univ, Coll Teacher Educ, Dept Curriculum & Pedag, Jinhua 321004, Peoples R China
[8] First Peoples Hosp Hefei, Dept Gen Surg, Hefei, Anhui, Peoples R China
[9] King Saud Univ, Coll Sci, Bot & Microbiol Dept, Riyadh 11451, Saudi Arabia
[10] SRMIST, SRM Coll Pharm, Chennai, India
[11] Zhejiang Normal Univ, Coll Teacher Educ, Dept Curriculum & Pedag, Sampson Agyapong Atuahene, Jinhua 321004, Peoples R China
[12] First Peoples Hosp Hefei, Dept Gen Surg, Hefei, Anhui, Peoples R China
来源
AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH | 2023年 / 15卷 / 03期
关键词
HAVCR1; pan; -cancer; therapeutic; biomarker; KIDNEY INJURY MOLECULE-1; RENAL-CELL CARCINOMA; LONG NONCODING RNA; GENE-EXPRESSION; TUMOR PROGRESSION; GASTRIC-CANCER; SURVIVAL; IDENTIFICATION; DATABASE; MARKER;
D O I
暂无
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Objectives: Cancer is one of the most prominent causes of death world wide. Identification of novel cancer biomarkers woud help with cancer diagnosis and possible treatment. Methods: In this study, we comprehensively studied the diagnostic, prognostic, and therapeutic values of the hepatitis A virus cellular receptor 1 (HAVCR1) gene across multiple cancers from a pan-cancer point of view via a detailed in silico approach. Results: HAVCR1 expression was up-regulated in a variety of malignancies. The up-regulated HAVCR1 was closely related to the poor prognosis in patients with esophageal carcinoma (ESCA), lung adenocarcinoma (LUAD), and stomach adenocarcinoma (STAD). Moreover, DAVID analysis showed that HAVCR1, along with different other associated genes, was involved in numerous cancer-associated signaling pathways across ESCA, STAD, and LUAD. Furthermore, in these cancers, HAVCR1 was also found closely associated with some other parameters such as promoter methylation, tumor purity, level of CD8+ T immune cells, genomic alterations, and chemotherapeutic drugs. Conclusion: HAVCR1 was overexpressed in multiple tumors. However, the up-regulated HAVCR1 is a valuable diagnostic and prognostic biomarker as well as a therapeutic target in only ESCA, STAD, and LUAD patients.
引用
收藏
页码:1590 / 1606
页数:17
相关论文
共 43 条
[11]   Epigenetic Modifications Basic Mechanisms and Role in Cardiovascular Disease [J].
Handy, Diane E. ;
Castro, Rita ;
Loscalzo, Joseph .
CIRCULATION, 2011, 123 (19) :2145-2156
[12]  
Hippo Y, 2002, CANCER RES, V62, P233
[13]   The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists [J].
Huang, Da Wei ;
Sherman, Brad T. ;
Tan, Qina ;
Collins, Jack R. ;
Alvord, W. Gregory ;
Roayaei, Jean ;
Stephens, Robert ;
Baseler, Michael W. ;
Lane, H. Clifford ;
Lempicki, Richard A. .
GENOME BIOLOGY, 2007, 8 (09)
[14]   HCP5 is a SMAD3-responsive long non-coding RNA that promotes lung adenocarcinoma metastasis via miR-203/SNAI axis [J].
Jiang, Lin ;
Wang, Ranran ;
Fang, Li ;
Ge, Xiaolu ;
Chen, Lingna ;
Zhou, Ming ;
Zhou, Yanhong ;
Xiong, Wei ;
Hu, Yerong ;
Tang, Xianming ;
Li, Guiyuan ;
Li, Zheng .
THERANOSTICS, 2019, 9 (09) :2460-2474
[15]   Determinants in the Ig Variable Domain of Human HAVCR1 (TIM-1) Are Required To Enhance Hepatitis C Virus Entry [J].
Kachko, Alla ;
Costafreda, Maria Isabel ;
Zubkova, Iryna ;
Jacques, Jerome ;
Takeda, Kazuyo ;
Wells, Frances ;
Kaplan, Gerardo ;
Major, Marian E. .
JOURNAL OF VIROLOGY, 2018, 92 (06)
[16]   A polymorphism in TIM1 is associated with susceptibility to severe hepatitis A virus infection in humans [J].
Kim, Hye Young ;
Belen Eyheramonho, Maria ;
Pichavant, Muriel ;
Gonzalez Cambaceres, Carlos ;
Matangkasombut, Ponpan ;
Cervio, Guillermo ;
Kuperman, Silvina ;
Moreiro, Rita ;
Konduru, Krishnamurthy ;
Manangeeswaran, Mohanraj ;
Freeman, Gordon J. ;
Kaplan, Gerardo G. ;
DeKruyff, Rosemarie H. ;
Umetsu, Dale T. ;
Rosenzweig, Sergio D. .
JOURNAL OF CLINICAL INVESTIGATION, 2011, 121 (03) :1111-1118
[17]   MEXPRESS: visualizing expression, DNA methylation and clinical TCGA data [J].
Koch, Alexander ;
De Meyer, Tim ;
Jeschke, Jana ;
Van Criekinge, Wim .
BMC GENOMICS, 2015, 16
[18]   Advances in cancer immunotherapy 2019-latest trends [J].
Kruger, Stephan ;
Ilmer, Matthias ;
Kobold, Sebastian ;
Cadilha, Bruno L. ;
Endres, Stefan ;
Ormanns, Steffen ;
Schuebbe, Gesa ;
Renz, Bernhard W. ;
D'Haese, Jan G. ;
Schloesser, Hans ;
Heinemann, Volker ;
Subklewe, Marion ;
Boeck, Stefan ;
Werner, Jens ;
von Bergwelt-Baildon, Michael .
JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH, 2019, 38 (1)
[19]   Strategies for discovering novel cancer biomarkers through utilization of emerging technologies [J].
Kulasingam, Vathany ;
Diamandis, Eleftherios P. .
NATURE CLINICAL PRACTICE ONCOLOGY, 2008, 5 (10) :588-599
[20]   TIMER2.0 for analysis of tumor-infiltrating immune cells [J].
Li, Taiwen ;
Fu, Jingxin ;
Zeng, Zexian ;
Cohen, David ;
Li, Jing ;
Chen, Qianming ;
Li, Bo ;
Liu, X. Shirley .
NUCLEIC ACIDS RESEARCH, 2020, 48 (W1) :W509-W514