Draft Genome Sequence of Lactiplantibacillus plantarum Strain ISO1, a Potential Probiotic Bacterium Isolated from the Milk of South African Saanen Goats

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作者
Makete, Goitsemang [1 ]
Mamphogoro, Tshifhiwa Paris [1 ]
机构
[1] Agr Res Council Anim Prod, Gastrointestinal Microbiol & Biotechnol Unit, Pretoria, South Africa
来源
MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2023年 / 12卷 / 02期
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D O I
10.1128/mra.01245-22
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Lactiplantibacillus plantarum strain ISO1, a potential probiotic with wide food and biotechnological applications, was isolated from the raw milk of South African Saanen goats. Here, we report the draft genome sequence of this bacterium. Sequencing yielded a 3.23-Mb genome and 2,967 protein-coding sequences. Lactiplantibacillus plantarum strain ISO1, a potential probiotic with wide food and biotechnological applications, was isolated from the raw milk of South African Saanen goats. Here, we report the draft genome sequence of this bacterium. Sequencing yielded a 3.23-Mb genome and 2,967 protein-coding sequences.
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  • [1] KBase: The United States Department of Energy Systems Biology Knowledgebase
    Arkin, Adam P.
    Cottingham, Robert W.
    Henry, Christopher S.
    Harris, Nomi L.
    Stevens, Rick L.
    Maslov, Sergei
    Dehal, Paramvir
    Ware, Doreen
    Perez, Fernando
    Canon, Shane
    Sneddon, Michael W.
    Henderson, Matthew L.
    Riehl, William J.
    Murphy-Olson, Dan
    Chan, Stephen Y.
    Kamimura, Roy T.
    Kumari, Sunita
    Drake, Meghan M.
    Brettin, Thomas S.
    Glass, Elizabeth M.
    Chivian, Dylan
    Gunter, Dan
    Weston, David J.
    Allen, Benjamin H.
    Baumohl, Jason
    Best, Aaron A.
    Bowen, Ben
    Brenner, Steven E.
    Bun, Christopher C.
    Chandonia, John-Marc
    Chia, Jer-Ming
    Colasanti, Ric
    Conrad, Neal
    Davis, James J.
    Davison, Brian H.
    DeJongh, Matthew
    Devoid, Scott
    Dietrich, Emily
    Dubchak, Inna
    Edirisinghe, Janaka N.
    Fang, Gang
    Faria, Jose P.
    Frybarger, Paul M.
    Gerlach, Wolfgang
    Gerstein, Mark
    Greiner, Annette
    Gurtowski, James
    Haun, Holly L.
    He, Fei
    Jain, Rashmi
    [J]. NATURE BIOTECHNOLOGY, 2018, 36 (07) : 566 - 569
  • [2] The RAST server: Rapid annotations using subsystems technology
    Aziz, Ramy K.
    Bartels, Daniela
    Best, Aaron A.
    DeJongh, Matthew
    Disz, Terrence
    Edwards, Robert A.
    Formsma, Kevin
    Gerdes, Svetlana
    Glass, Elizabeth M.
    Kubal, Michael
    Meyer, Folker
    Olsen, Gary J.
    Olson, Robert
    Osterman, Andrei L.
    Overbeek, Ross A.
    McNeil, Leslie K.
    Paarmann, Daniel
    Paczian, Tobias
    Parrello, Bruce
    Pusch, Gordon D.
    Reich, Claudia
    Stevens, Rick
    Vassieva, Olga
    Vonstein, Veronika
    Wilke, Andreas
    Zagnitko, Olga
    [J]. BMC GENOMICS, 2008, 9 (1)
  • [3] Functional Annotation of Lactiplantibacillus plantarum 13-3 as a Potential Starter Probiotic Involved in the Food Safety of Fermented Products
    Aziz, Tariq
    Naveed, Muhammad
    Sarwar, Abid
    Makhdoom, Syeda Izma
    Mughal, Muhammad Saad
    Ali, Urooj
    Yang, Zhennai
    Shahzad, Muhammad
    Sameeh, Manal Y.
    Alruways, Mashael W.
    Dablool, Anas S.
    Almalki, Abdulraheem Ali
    Alamri, Abdulhakeem S.
    Alhomrani, Majid
    [J]. MOLECULES, 2022, 27 (17):
  • [4] Trimmomatic: a flexible trimmer for Illumina sequence data
    Bolger, Anthony M.
    Lohse, Marc
    Usadel, Bjoern
    [J]. BIOINFORMATICS, 2014, 30 (15) : 2114 - 2120
  • [5] Garcia-Gonzalez N, 2021, MICROORGANISMS, V9, DOI 10.3390/microorganisms9020349
  • [6] RefSeq: an update on prokaryotic genome annotation and curation
    Haft, Daniel H.
    DiCuccio, Michael
    Badretdin, Azat
    Brover, Vyacheslav
    Chetvernin, Vyacheslav
    O'Neill, Kathleen
    Li, Wenjun
    Chitsaz, Farideh
    Derbyshire, Myra K.
    Gonzales, Noreen R.
    Gwadz, Marc
    Lu, Fu
    Marchler, Gabriele H.
    Song, James S.
    Thanki, Narmada
    Yamashita, Roxanne A.
    Zheng, Chanjuan
    Thibaud-Nissen, Francoise
    Geer, Lewis Y.
    Marchler-Bauer, Aron
    Pruitt, Kim D.
    [J]. NUCLEIC ACIDS RESEARCH, 2018, 46 (D1) : D851 - D860
  • [7] Isolation, Identification and Screening of Potential Probiotic Bacteria in Milk from South African Saanen Goats
    Makete, Goitsemang
    Aiyegoro, Olayinka A.
    Thantsha, Mapitsi S.
    [J]. PROBIOTICS AND ANTIMICROBIAL PROTEINS, 2017, 9 (03) : 246 - 254
  • [8] Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products
    Nurk, Sergey
    Bankevich, Anton
    Antipov, Dmitry
    Gurevich, Alexey A.
    Korobeynikov, Anton
    Lapidus, Alla
    Prjibelski, Andrey D.
    Pyshkin, Alexey
    Sirotkin, Alexander
    Sirotkin, Yakov
    Stepanauskas, Ramunas
    Clingenpeel, Scott R.
    Woyke, Tanja
    Mclean, Jeffrey S.
    Lasken, Roger
    Tesler, Glenn
    Alekseyev, Max A.
    Pevzner, Pavel A.
    [J]. JOURNAL OF COMPUTATIONAL BIOLOGY, 2013, 20 (10) : 714 - 737
  • [9] Measuring dementia carers' unmet need for services - an exploratory mixed method study
    Stirling, Christine
    Andrews, Sharon
    Croft, Toby
    Vickers, James
    Turner, Paul
    Robinson, Andrew
    [J]. BMC HEALTH SERVICES RESEARCH, 2010, 10
  • [10] Genomic and Phylogenetic Analysis of Lactiplantibacillus plantarum L125, and Evaluation of Its Anti-Proliferative and Cytotoxic Activity in Cancer Cells
    Tegopoulos, Konstantinos
    Stergiou, Odysseas Sotirios
    Kiousi, Despoina Eugenia
    Tsifintaris, Margaritis
    Koletsou, Ellie
    Papageorgiou, Aristotelis C.
    Argyri, Anthoula A.
    Chorianopoulos, Nikos
    Galanis, Alex
    Kolovos, Petros
    [J]. BIOMEDICINES, 2021, 9 (11)