The maximal coordination principle in regulatory Boolean networks

被引:0
|
作者
Poindron, Alexis [1 ]
机构
[1] Inst Polytech Paris, ENSTA Paris, Unite Econ Appl, Palaiseau, France
关键词
Boolean networks; Coordination; Inference; Influence processes; Opinion dynamics; FIXED-POINTS; MODEL; STABILITY; CIRCUITS; GRAPHS; NUMBER;
D O I
10.1016/j.jcss.2024.103518
中图分类号
TP3 [计算技术、计算机技术];
学科分类号
0812 ;
摘要
We introduce a coordination index in regulatory Boolean networks and we expose the maximal coordination principle (MCP), according to which a cohesive society reaches the dynamics characterized by the highest coordination index. Based on simple theoretical examples, we show that the MCP can be used to infer the influence graph from opinion dynamics/gene expressions. We provide some algorithms to apply the MCP and we compare the coordination index with existing statistical indexes (likelihood, entropy). The advantage of the coordination approach is its simplicity; in particular, we do not need to impose restrictions on the aggregation functions. (c) 2024 Elsevier Inc. All rights reserved.
引用
收藏
页数:27
相关论文
共 50 条
  • [1] Asynchronous Simulation of Boolean Networks by Monotone Boolean Networks
    Melliti, Tarek
    Regnault, Damien
    Richard, Adrien
    Sene, Sylvain
    CELLULAR AUTOMATA, ACRI 2016, 2016, 9863 : 182 - 191
  • [2] Phenotype Control techniques for Boolean gene regulatory networks
    Plaugher, Daniel
    Murrugarra, David
    BULLETIN OF MATHEMATICAL BIOLOGY, 2023, 85 (09)
  • [3] On Boolean control networks with maximal topological entropy
    Laschov, Dmitriy
    Margaliot, Michael
    AUTOMATICA, 2014, 50 (11) : 2924 - 2928
  • [4] Computing maximal and minimal trap spaces of Boolean networks
    Klarner, Hannes
    Bockmayr, Alexander
    Siebert, Heike
    NATURAL COMPUTING, 2015, 14 (04) : 535 - 544
  • [5] Computing maximal and minimal trap spaces of Boolean networks
    Hannes Klarner
    Alexander Bockmayr
    Heike Siebert
    Natural Computing, 2015, 14 : 535 - 544
  • [6] Concurrency in Boolean networks
    Chatain, Thomas
    Haar, Stefan
    Kolcak, Juraj
    Pauleve, Loic
    Thakkar, Aalok
    NATURAL COMPUTING, 2020, 19 (01) : 91 - 109
  • [7] Evolving Boolean regulatory networks with epigenetic control
    Bull, Larry
    BIOSYSTEMS, 2014, 116 : 36 - 42
  • [8] An Information Theoretic Approach to Constructing Robust Boolean Gene Regulatory Networks
    Vasic, Bane
    Ravanmehr, Vida
    Krishnan, Anantha Raman
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2012, 9 (01) : 52 - 65
  • [9] Attractor Stabilizability of Boolean Networks With Application to Biomolecular Regulatory Networks
    Rafimanzelat, Mohammad Reza
    Bahrami, Fariba
    IEEE TRANSACTIONS ON CONTROL OF NETWORK SYSTEMS, 2019, 6 (01): : 72 - 81
  • [10] Leveraging developmental landscapes for model selection in Boolean gene regulatory networks
    Subbaroyan, Ajay
    Sil, Priyotosh
    Martin, Olivier C.
    Samal, Areejit
    BRIEFINGS IN BIOINFORMATICS, 2023,