Prognostic implication of a ferroptosis-related gene signature associates with immunity in Ewing's sarcoma

被引:2
|
作者
Jiao, Xiejia [1 ]
Li, Qingbo [1 ]
Xu, Xiao [2 ]
机构
[1] Shandong Univ, Hosp 2, Dept Orthoped, Jinan, Peoples R China
[2] First People Hosp Jinan, Sterile Supply Dept, Jinan, Peoples R China
关键词
Bone sarcoma; Cancer; Ewing's sarcoma; Ferroptosis; FRGs; Immune; Nomogram; Prognosis; Risk model; Signatures; Survival;
D O I
10.1016/j.ejbt.2023.01.004
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: Ewing's sarcoma is an extremely aggressive bone sarcoma in teenagers and adolescents. We managed to identify the potential role of ferroptosis-related genes (FRGs) in Ewing's sarcoma and its clinical prognostic value.Results: A total of 59 common differentially expressed FRGs were screened out. GO/KEGG enrichment and PPI network were executed. Based on 16 prognostic-related FRGs identified by univariate Cox regression in GSE17674, 2 molecular clusters were screened out via NMF consensus. Survival rate and immune infiltration were totally different in two clusters. Subsequently, multivariate/step Cox regression was conducted to identify 7 risk signatures (SLC2A1, PCK2, CHAC1, ATG13, PRKAA2, ARNT, and SIRT1). K-M survival (p = 1.785e-06) and ROC curves (with AUC value 0.816, 0877, 0.919 in 1, 3, 5 years) were plotted to assess the good predictive ability of risk model. ICGC dataset with K-M survival (p = 1.558e-02) and AUC value (0.886, 0.750, 0.709 in 1, 3, 5 years) was used to validate the risk model. Risk score and clinical features (gender, age stage status) were incorporated into a nomogram model. Immune microenvironment (IME) ingredients (ESTIMATE score, immune cells, immune-related pathways, and checkpoint genes) between two risk groups were also explored. High-risk group possessed an activated immune status compared to low-risk group. Finally,
引用
收藏
页码:42 / 58
页数:17
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