Neutralization profiles of HIV-1 viruses from the VRC01 Antibody Mediated Prevention (AMP) trials

被引:17
作者
Mkhize, Nonhlanhla N. [1 ,2 ]
Yssel, Anna [3 ]
Kaldine, Haajira [1 ,2 ]
van Dorsten, Rebecca T. [1 ,2 ,4 ]
Davis, Amanda S. [5 ]
Beaume, Nicolas [3 ]
Matten, David [3 ]
Lambson, Bronwen [1 ,2 ]
Modise, Tandile [1 ,2 ]
Kgagudi, Prudence [1 ,2 ]
York, Talita [3 ]
Westfall, Dylan H. [6 ]
Giorgi, Elena E. [5 ]
Korber, Bette [7 ]
Anthony, Colin [3 ]
Mapengo, Rutendo E. [1 ,2 ]
Bekker, Valerie [1 ]
Domin, Elizabeth [8 ]
Eaton, Amanda [8 ]
Deng, Wenjie [6 ]
DeCamp, Allan [5 ]
Huang, Yunda [5 ]
Gilbert, Peter B. [5 ]
Gwashu-Nyangiwe, Asanda [3 ]
Thebus, Ruwayhida [3 ]
Ndabambi, Nonkululeko [3 ]
Mielke, Dieter [3 ,8 ]
Mgodi, Nyaradzo [9 ]
Karuna, Shelly [5 ]
Edupuganti, Srilatha [10 ]
Seaman, Michael S. [11 ]
Corey, Lawrence [5 ,12 ]
Cohen, Myron S. [13 ]
Hural, John [5 ]
McElrath, M. Juliana [5 ]
Mullins, James I. [6 ]
Montefiori, David [8 ]
Moore, Penny L. [1 ,2 ,14 ]
Williamson, Carolyn [3 ,14 ,15 ]
Morris, Lynn [1 ,2 ,14 ]
机构
[1] Natl Hlth Lab Serv, Natl Inst Communicable Dis, Johannesburg, South Africa
[2] Univ Witwatersrand, Fac Hlth Sci, SA MRC Antibody Immun Res Unit, Johannesburg, South Africa
[3] Univ Cape Town, Inst Infect Dis & Mol Med, Fac Hlth Sci, Div Med Virol, Cape Town, South Africa
[4] Univ Witwatersrand, Sch Pathol, South African Med Res Council, Fac Hlth Sci,Antiviral Gene Therapy Res Unit, Johannesburg, South Africa
[5] Fred Hutchinson Canc Ctr, Vaccine & Infect Dis Div, Seattle, WA USA
[6] Univ Washington, Dept Microbiol, Seattle, WA USA
[7] Los Alamos Natl Lab, Los Alamos, NM USA
[8] Duke Univ, Dept Surg, Durham, NC USA
[9] Univ Zimbabwe, Coll Hlth Sci, Clin Trials Res Ctr, Harare, Zimbabwe
[10] Emory Univ, Dept Med, Div Infect Dis, Decatur, GA USA
[11] Harvard Med Sch, Beth Israel Deaconess Med Ctr, Ctr Virol & Vaccine Res, Boston, MA USA
[12] Univ Washington, Dept Lab Med, Seattle, WA USA
[13] Univ North Carolina Chapel Hill, Dept Med, Chapel Hill, NC USA
[14] Univ KwaZulu Natal, Ctr AIDS Programme Res South Africa CAPRISA, Durban, South Africa
[15] Natl Hlth Lab Serv, Cape Town, South Africa
基金
新加坡国家研究基金会; 美国国家卫生研究院;
关键词
HUMAN MONOCLONAL-ANTIBODIES; HUMORAL IMMUNITY; POTENT NEUTRALIZATION; IMPROVES PROTECTION; ENVELOPE; GP120; BREADTH; BROAD; ADAPTATION; EVOLUTION;
D O I
10.1371/journal.ppat.1011469
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The VRC01 Antibody Mediated Prevention (AMP) efficacy trials conducted between 2016 and 2020 showed for the first time that passively administered broadly neutralizing antibodies (bnAbs) could prevent HIV-1 acquisition against bnAb-sensitive viruses. HIV-1 viruses isolated from AMP participants who acquired infection during the study in the sub-Saharan African (HVTN 703/HPTN 081) and the Americas/European (HVTN 704/HPTN 085) trials represent a panel of currently circulating strains of HIV-1 and offer a unique opportunity to investigate the sensitivity of the virus to broadly neutralizing antibodies (bnAbs) being considered for clinical development. Pseudoviruses were constructed using envelope sequences from 218 individuals. The majority of viruses identified were clade B and C; with clades A, D, F and G and recombinants AC and BF detected at lower frequencies. We tested eight bnAbs in clinical development (VRC01, VRC07-523LS, 3BNC117, CAP256.25, PGDM1400, PGT121, 10-1074 and 10E8v4) for neutralization against all AMP placebo viruses (n = 76). Compared to older clade C viruses (1998-2010), the HVTN703/HPTN081 clade C viruses showed increased resistance to VRC07-523LS and CAP256.25. At a concentration of 1 & mu;g/ml (IC80), predictive modeling identified the triple combination of V3/V2-glycan/CD4bs-targeting bnAbs (10-1074/PGDM1400/VRC07-523LS) as the best against clade C viruses and a combination of MPER/V3/CD4bs-targeting bnAbs (10E8v4/10-1074/VRC07-523LS) as the best against clade B viruses, due to low coverage of V2-glycan directed bnAbs against clade B viruses. Overall, the AMP placebo viruses represent a valuable resource for defining the sensitivity of contemporaneous circulating viral strains to bnAbs and highlight the need to update reference panels regularly. Our data also suggests that combining bnAbs in passive immunization trials would improve coverage of global viruses. Author summaryHIV-1 viruses from the Antibody Mediated Prevention (AMP) trials, obtained in 2016-2020, represent our most recent panel of transmitted viruses in the population. Reference virus strains that are currently used to evaluate broadly neutralizing antibodies (bnAb) for passive immune trials and assess the quality of vaccine induced antibody responses, were collected between 1998 and 2010. As HIV-1 continues to evolve, virus panels may need to be updated from time to time. Sequences were obtained from participants infected with HIV-1 from both the African (HVTN 703/HPTN081) and the Americas/European (HVTN 704/HPTN085) AMP trials. These viruses were then tested in a neutralization assay with 8 bnAbs under clinical development. Comparing the neutralization coverage with older viruses, we found that recent viruses have become more resistant to VRC07-523LS and CAP256.25 antibodies. Predictive modelling identified triple bnAb combinations that would be effective at neutralizing HIV-1 strains from different geographical regions. Reference panels that include recently transmitted HIV-1 strains provide important information that can be used to design bnAb combinations to consider for prevention studies.
引用
收藏
页数:17
相关论文
共 54 条
  • [1] Adaptation of HIV-1 Envelope Glycoprotein gp120 to Humoral Immunity over the Course of the Epidemic
    Bouvin-Pley, Melanie
    Morgand, Marion
    Moreau, Alain
    Meyer, Laurence
    Goujard, Cecile
    Mouquet, Hugo
    Nussenzweig, Michel C.
    Pace, Craig S.
    Ho, David D.
    Bjorkman, Pamela J.
    Baty, Daniel
    Chames, Patrick
    Pancera, Marie
    Kwong, Peter D.
    Poignard, Pascal
    Barin, Francis
    Braibant, Martine
    [J]. AIDS RESEARCH AND HUMAN RETROVIRUSES, 2014, 30 : A224 - A224
  • [2] HIV-1 Neutralizing Antibody Signatures and Application to Epitope-Targeted Vaccine Design
    Bricault, Christine A.
    Yusim, Karina
    Seaman, Michael S.
    Yoon, Hyejin
    Theiler, James
    Giorgi, Elena E.
    Wagh, Kshitij
    Theiler, Maxwell
    Hraber, Peter
    Macke, Jennifer P.
    Kreider, Edward F.
    Learn, Gerald H.
    Hahn, Beatrice H.
    Scheid, Johannes F.
    Kovacs, James M.
    Shields, Jennifer L.
    Lavine, Christy L.
    Ghantous, Fadi
    Rist, Michael
    Bayne, Madeleine G.
    Neubauer, George H.
    McMahan, Katherine
    Peng, Hanqin
    Cheneau, Coraline
    Jones, Jennifer J.
    Zeng, Jie
    Ochsenbauer, Christina
    Nkolola, Joseph P.
    Stephenson, Kathryn E.
    Chen, Bing
    Gnanakaran, S.
    Bonsignori, Mattia
    Williams, LaTonya D.
    Haynes, Barton F.
    Doria-Rose, Nicole
    Mascola, John R.
    Montefiori, David C.
    Barouch, Dan H.
    Korber, Bette
    [J]. CELL HOST & MICROBE, 2019, 25 (01) : 59 - +
  • [3] Autologous neutralizing humoral immunity and evolution of the viral envelope in the course of subtype B human immunodeficiency virus type 1 infection
    Bunnik, Evelien M.
    Pisas, Linaida
    van Nuenen, Ad C.
    Schuitemaker, Hanneke
    [J]. JOURNAL OF VIROLOGY, 2008, 82 (16) : 7932 - 7941
  • [4] Adaptation of HIV-1 envelope gp120 to humoral immunity at a population level
    Bunnik, Evelien M.
    Euler, Zelda
    Welkers, Matthijs R. A.
    Boeser-Nunnink, Brigitte D. M.
    Grijsen, Marlous L.
    Prins, Jan M.
    Schuitemaker, Hanneke
    [J]. NATURE MEDICINE, 2010, 16 (09) : 995 - 997
  • [5] Viraemia suppressed in HIV-1-infected humans by broadly neutralizing antibody 3BNC117
    Caskey, Marina
    Klein, Florian
    Lorenzi, Julio C. C.
    Seaman, Michael S.
    West, Anthony P., Jr.
    Buckley, Noreen
    Kremer, Gisela
    Nogueira, Lilian
    Braunschweig, Malte
    Scheid, Johannes F.
    Horwitz, Joshua A.
    Shimeliovich, Irina
    Ben-Avraham, Sivan
    Witmer-Pack, Maggi
    Platten, Martin
    Lehmann, Clara
    Burke, Leah A.
    Hawthorne, Thomas
    Gorelick, Robert J.
    Walker, Bruce D.
    Keler, Tibor
    Gulick, Roy M.
    Faetkenheuer, Gerd
    Schlesinger, Sarah J.
    Nussenzweig, Michel C.
    [J]. NATURE, 2015, 522 (7557) : 487 - +
  • [6] The first hypervariable region of the gp120 Env glycoprotein defines the neutralizing susceptibility of heterologous human immunodeficiency virus type 1 isolates to neutralizing antibodies elicited by the SF162gp140 immunogen
    Ching, Lance K.
    Vlachogiannis, Giorgos
    Bosch, Katherine A.
    Stamatatos, Leonidas
    [J]. JOURNAL OF VIROLOGY, 2008, 82 (02) : 949 - 956
  • [7] Two Randomized Trials of Neutralizing Antibodies to Prevent HIV-1 Acquisition
    Corey, L.
    Gilbert, P. B.
    Juraska, M.
    Montefiori, D. C.
    Morris, L.
    Karuna, S. T.
    Edupuganti, S.
    Mgodi, N. M.
    deCamp, A. C.
    Rudnicki, E.
    Huang, Y.
    Gonzales, P.
    Cabello, R.
    Orrell, C.
    Lama, J. R.
    Laher, F.
    Lazarus, E. M.
    Sanchez, J.
    Frank, I.
    Hinojosa, J.
    Sobieszczyk, M. E.
    Marshall, K. E.
    Mukwekwerere, P. G.
    Makhema, J.
    Baden, L. R.
    Mullins, J. I.
    Williamson, C.
    Hural, J.
    McElrath, M. J.
    Bentley, C.
    Takuva, S.
    Lorenzo, M. M. Gomez
    Burns, D. N.
    Espy, N.
    Randhawa, A. K.
    Kochar, N.
    Piwowar-Manning, E.
    Donnell, D. J.
    Sista, N.
    Andrew, P.
    Kublin, J. G.
    Gray, G.
    Ledgerwood, J. E.
    Mascola, J. R.
    Cohen, M. S.
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2021, 384 (11) : 1003 - 1014
  • [8] HIV-1 Envelope Subregion Length Variation during Disease Progression
    Curlin, Marcel E.
    Zioni, Rafael
    Hawes, Stephen E.
    Liu, Yi
    Deng, Wenjie
    Gottlieb, Geoffrey S.
    Zhu, Tuofu
    Mullins, James I.
    [J]. PLOS PATHOGENS, 2010, 6 (12)
  • [9] Global Panel of HIV-1 Env Reference Strains for Standardized Assessments of Vaccine-Elicited Neutralizing Antibodies
    deCamp, Allan
    Hraber, Peter
    Bailer, Robert T.
    Seaman, Michael S.
    Ochsenbauer, Christina
    Kappes, John
    Gottardo, Raphael
    Edlefsen, Paul
    Self, Steve
    Tang, Haili
    Greene, Kelli
    Gao, Hongmei
    Daniell, Xiaoju
    Sarzotti-Kelsoe, Marcella
    Gorny, Miroslaw K.
    Zolla-Pazner, Susan
    LaBranche, Celia C.
    Mascola, John R.
    Korber, Bette T.
    Montefiori, David C.
    [J]. JOURNAL OF VIROLOGY, 2014, 88 (05) : 2489 - 2507
  • [10] New Member of the V1V2-Directed CAP256-VRC26 Lineage That Shows Increased Breadth and Exceptional Potency
    Doria-Rose, Nicole A.
    Bhiman, Jinal N.
    Roark, Ryan S.
    Schramm, Chaim A.
    Gorman, Jason
    Chuang, Gwo-Yu
    Pancera, Marie
    Cale, Evan M.
    Ernandes, Michael J.
    Louder, Mark K.
    Asokan, Mangaiarkarasi
    Bailer, Robert T.
    Druz, Aliaksandr
    Fraschilla, Isabella R.
    Garrett, Nigel J.
    Jarosinski, Marissa
    Lynch, Rebecca M.
    McKee, Krisha
    O'Dell, Sijy
    Pegu, Amarendra
    Schmidt, Stephen D.
    Staupe, Ryan P.
    Sutton, Matthew S.
    Wang, Keyun
    Wibmer, Constantinos Kurt
    Haynes, Barton F.
    Abdool-Karim, Salim
    Shapiro, Lawrence
    Kwong, Peter D.
    Moore, Penny L.
    Morris, Lynn
    Mascola, John R.
    [J]. JOURNAL OF VIROLOGY, 2016, 90 (01) : 76 - 91