SRENet: a spatiotemporal relationship-enhanced 2D-CNN-based framework for staging and segmentation of kidney cancer using CT images
被引:5
作者:
Liang, Shuang
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机构:
Capital Med Univ, Sch Biomed Engn, Xitoutiao, YouAnMen, 10,Xitoutiao,YouAnMen,Fengtai Dist, Beijing 100069, Peoples R ChinaCapital Med Univ, Sch Biomed Engn, Xitoutiao, YouAnMen, 10,Xitoutiao,YouAnMen,Fengtai Dist, Beijing 100069, Peoples R China
Liang, Shuang
[1
]
Gu, Yu
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机构:
Capital Med Univ, Sch Biomed Engn, Xitoutiao, YouAnMen, 10,Xitoutiao,YouAnMen,Fengtai Dist, Beijing 100069, Peoples R ChinaCapital Med Univ, Sch Biomed Engn, Xitoutiao, YouAnMen, 10,Xitoutiao,YouAnMen,Fengtai Dist, Beijing 100069, Peoples R China
Gu, Yu
[1
]
机构:
[1] Capital Med Univ, Sch Biomed Engn, Xitoutiao, YouAnMen, 10,Xitoutiao,YouAnMen,Fengtai Dist, Beijing 100069, Peoples R China
Kidney cancer (KC) is among the 10 most common cancers posing health threats to humans, with an average lifetime risk of 1.53%. Computed tomography (CT) is regarded as the golden standard for the characterization of KC and is widely used for KC prognosis. However, it is challenging to segment KC in CT images and perform cancer staging simultaneously due to the variable positions and shapes of kidney tumors and similar textural features in the background and target areas. We propose a novel spatiotemporal relationship-enhanced convolutional neural network (CNN)-based framework called SRENet. It consists of a spatial transformer framework and a residual U-Net with a temporal relationship extraction module for the staging and segmentation of KC. The SRENet achieves excellent performance on six evaluation metrics (Kappa, Sensitivity, Specificity, Precision, Accuracy, F1-score) for KC staging with an F1-score of 98.46%. The framework demonstrates a strong and reliable capacity for kidney and KC segmentation with Dice coefficients (DCs) of 97.89% and 92.54%, respectively, outperforming the state-of-the-art models (ResNeXt-101, ViT and Swin-Transformer for staging, and VNet, UNet 3+ and nnUNet for segmentation). The proposed SRENet helps accelerate the development of reliable kidney and KC segmentation methodologies and shows significant potential for KC diagnosis in clinical practice.
机构:
Beijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R ChinaBeijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R China
Cai, Lei
;
Gao, Jingyang
论文数: 0引用数: 0
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机构:
Beijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R ChinaBeijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R China
Gao, Jingyang
;
Zhao, Di
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Inst Comp Technol, Beijing, Peoples R ChinaBeijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R China
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Univ Paris Saclay, Telecom ParisTech, LTCI, F-75013 Paris, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Couteaux, V
;
Si-Mohamed, S.
论文数: 0引用数: 0
h-index: 0
机构:
Claude Bernard Lyon 1 Univ, INSA Lyon, Inserm U1206, CREATIS,CNRS UMR 5220, F-69100 Villeurbanne, France
Hosp Civils Lyon, Dept Radiol, F-69002 Lyon, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Si-Mohamed, S.
;
Renard-Penna, R.
论文数: 0引用数: 0
h-index: 0
机构:
Sorbonne Univ, Hop Tenon, AP HP, GRC UPMC 5 Oncotype URO,Dept Radiol, F-75020 Paris, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Renard-Penna, R.
;
Nempont, O.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Nempont, O.
;
Lefevre, T.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Lefevre, T.
;
Popoff, A.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Popoff, A.
;
Pizaine, G.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Pizaine, G.
;
Villain, N.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Villain, N.
;
论文数: 引用数:
h-index:
机构:
Bloch, I
;
Behr, J.
论文数: 0引用数: 0
h-index: 0
机构:
CHRU Besancon, Dept Radiol, F-25000 Besancon, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Behr, J.
;
Bellin, M-F
论文数: 0引用数: 0
h-index: 0
机构:
Hop Univ Paris Sud, Dept Radiol, F-94270 Le Kremlin Bicetre, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Bellin, M-F
;
Roy, C.
论文数: 0引用数: 0
h-index: 0
机构:
CHU Strasbourg, Nouvel Hop Civil, Dept Radiol, F-67000 Strasbourg, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Roy, C.
;
Rouviere, O.
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Civils Lyon, Dept Uroradiol, Fac Med Lyon Est, F-69002 Lyon, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Rouviere, O.
;
Montagne, S.
论文数: 0引用数: 0
h-index: 0
机构:
Hop La Pitie Salpetriere, AP HP, Dept Radiol, F-75013 Paris, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Montagne, S.
;
Lassau, N.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Paris Saclay, Univ Paris Sud, Dept Radiol, Gustave Roussy,IR4M,UMR8081,CNRS, F-94805 Villejuif, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Lassau, N.
;
Boussel, L.
论文数: 0引用数: 0
h-index: 0
机构:
Claude Bernard Lyon 1 Univ, INSA Lyon, Inserm U1206, CREATIS,CNRS UMR 5220, F-69100 Villeurbanne, France
Hosp Civils Lyon, Dept Radiol, F-69002 Lyon, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
机构:
Univ Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, FranceUniv Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, France
Schilling, Sabrina
;
Duperron, Marie-Gabrielle
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, FranceUniv Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, France
Duperron, Marie-Gabrielle
;
Larsson, Susanna C.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cambridge, Dept Clin Neurosci, Stroke Res Grp, Cambridge Biomed Campus, Cambridge, England
Karolinska Inst, Inst Environm Med, Unit Nutr Epidemiol, Stockholm, SwedenUniv Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, France
Larsson, Susanna C.
;
Markus, Hugh S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cambridge, Dept Clin Neurosci, Stroke Res Grp, Cambridge Biomed Campus, Cambridge, EnglandUniv Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, France
机构:
Beijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R ChinaBeijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R China
Cai, Lei
;
Gao, Jingyang
论文数: 0引用数: 0
h-index: 0
机构:
Beijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R ChinaBeijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R China
Gao, Jingyang
;
Zhao, Di
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Inst Comp Technol, Beijing, Peoples R ChinaBeijing Univ Chem Technol, Coll Informat Engn & Technol, 15 East North Third Ring Rd, Beijing, Peoples R China
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Univ Paris Saclay, Telecom ParisTech, LTCI, F-75013 Paris, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Couteaux, V
;
Si-Mohamed, S.
论文数: 0引用数: 0
h-index: 0
机构:
Claude Bernard Lyon 1 Univ, INSA Lyon, Inserm U1206, CREATIS,CNRS UMR 5220, F-69100 Villeurbanne, France
Hosp Civils Lyon, Dept Radiol, F-69002 Lyon, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Si-Mohamed, S.
;
Renard-Penna, R.
论文数: 0引用数: 0
h-index: 0
机构:
Sorbonne Univ, Hop Tenon, AP HP, GRC UPMC 5 Oncotype URO,Dept Radiol, F-75020 Paris, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Renard-Penna, R.
;
Nempont, O.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Nempont, O.
;
Lefevre, T.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Lefevre, T.
;
Popoff, A.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Popoff, A.
;
Pizaine, G.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Pizaine, G.
;
Villain, N.
论文数: 0引用数: 0
h-index: 0
机构:
Philips Res France, 33 Rue Verdun, F-92150 Suresnes, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Villain, N.
;
论文数: 引用数:
h-index:
机构:
Bloch, I
;
Behr, J.
论文数: 0引用数: 0
h-index: 0
机构:
CHRU Besancon, Dept Radiol, F-25000 Besancon, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Behr, J.
;
Bellin, M-F
论文数: 0引用数: 0
h-index: 0
机构:
Hop Univ Paris Sud, Dept Radiol, F-94270 Le Kremlin Bicetre, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Bellin, M-F
;
Roy, C.
论文数: 0引用数: 0
h-index: 0
机构:
CHU Strasbourg, Nouvel Hop Civil, Dept Radiol, F-67000 Strasbourg, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Roy, C.
;
Rouviere, O.
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Civils Lyon, Dept Uroradiol, Fac Med Lyon Est, F-69002 Lyon, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Rouviere, O.
;
Montagne, S.
论文数: 0引用数: 0
h-index: 0
机构:
Hop La Pitie Salpetriere, AP HP, Dept Radiol, F-75013 Paris, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Montagne, S.
;
Lassau, N.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Paris Saclay, Univ Paris Sud, Dept Radiol, Gustave Roussy,IR4M,UMR8081,CNRS, F-94805 Villejuif, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
Lassau, N.
;
Boussel, L.
论文数: 0引用数: 0
h-index: 0
机构:
Claude Bernard Lyon 1 Univ, INSA Lyon, Inserm U1206, CREATIS,CNRS UMR 5220, F-69100 Villeurbanne, France
Hosp Civils Lyon, Dept Radiol, F-69002 Lyon, FrancePhilips Res France, 33 Rue Verdun, F-92150 Suresnes, France
机构:
Univ Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, FranceUniv Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, France
Schilling, Sabrina
;
Duperron, Marie-Gabrielle
论文数: 0引用数: 0
h-index: 0
机构:
Univ Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, FranceUniv Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, France
Duperron, Marie-Gabrielle
;
Larsson, Susanna C.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cambridge, Dept Clin Neurosci, Stroke Res Grp, Cambridge Biomed Campus, Cambridge, England
Karolinska Inst, Inst Environm Med, Unit Nutr Epidemiol, Stockholm, SwedenUniv Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, France
Larsson, Susanna C.
;
Markus, Hugh S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Cambridge, Dept Clin Neurosci, Stroke Res Grp, Cambridge Biomed Campus, Cambridge, EnglandUniv Bordeaux, INSERM 1219, Bordeaux Populat Hlth Res Ctr, 146 Rue Leo Saignat, F-33076 Bordeaux, France