Application and utility of boosting machine learning model based on laboratory test in the differential diagnosis of non-COVID-19 pneumonia and COVID-19

被引:4
作者
Baik, Seung Min [1 ,2 ]
Hong, Kyung Sook [3 ]
Park, Dong Jin [4 ,5 ]
机构
[1] Ewha Womans Univ, Coll Med, Dept Surg, Div Crit Care Med,Mokdong Hosp, Seoul, South Korea
[2] Korea Univ, Dept Surg, Coll Med, Seoul, South Korea
[3] Ewha Womans Univ, Coll Med, Dept Surg, Div Crit Care Med,Seoul Hosp, Seoul, South Korea
[4] Catholic Univ Korea, Eunpyeong St Marys Hosp, Coll Med, Dept Lab Med, Seoul, South Korea
[5] Catholic Univ Korea, Eunpyeong St Marys Hosp, Coll Med, Dept Lab Med, 1021 Tongil Ro, Seoul 03312, South Korea
关键词
Artificial intelligence; Boosting model; Laboratory test; Differential diagnosis; COVID-19; Non-COVID-19; pneumonia;
D O I
10.1016/j.clinbiochem.2023.05.003
中图分类号
R446 [实验室诊断]; R-33 [实验医学、医学实验];
学科分类号
1001 ;
摘要
Background: Non-Coronavirus disease 2019 (COVID-19) pneumonia and COVID-19 have similar clinical features but last for different periods, and consequently, require different treatment protocols. Therefore, they must be differentially diagnosed. This study uses artificial intelligence (AI) to classify the two forms of pneumonia using mainly laboratory test data.Methods: Various AI models are applied, including boosting models known for deftly solving classification problems. In addition, important features that affect the classification prediction performance are identified using the feature importance technique and SHapley Additive exPlanations method. Despite the data imbalance, the developed model exhibits robust performance. Results: eXtreme gradient boosting, category boosting, and light gradient boosted machine yield an area under the receiver operating characteristic of 0.99 or more, accuracy of 0.96-0.97, and F1-score of 0.96-0.97. In addition, D-dimer, eosinophil, glucose, aspartate aminotransferase, and basophil, which are rather nonspecific laboratory test results, are demonstrated to be important features in differentiating the two disease groups.Conclusions: The boosting model, which excels in producing classification models using categorical data, excels in developing classification models using linear numerical data, such as laboratory tests. Finally, the proposed model can be applied in various fields to solve classification problems.
引用
收藏
页数:7
相关论文
共 45 条
[1]   Negative pressure rooms and COVID-19 [J].
Al-Benna, Sammy .
JOURNAL OF PERIOPERATIVE PRACTICE, 2021, 31 (1-2) :18-23
[2]  
[Anonymous], 2020, WHO COVID 19 DASHB
[3]   Artificial intelligence on COVID-19 pneumonia detection using chest xray images [J].
Baltazar, Lei Rigi ;
Manzanillo, Mojhune Gabriel ;
Gaudillo, Joverlyn ;
Viray, Ethel Dominique ;
Domingo, Mario ;
Tiangco, Beatrice ;
Albia, Jason .
PLOS ONE, 2021, 16 (10)
[4]   Emergence of a Novel Coronavirus Disease (COVID-19) and the Importance of Diagnostic Testing: Why Partnership between Clinical Laboratories, Public Health Agencies, and Industry Is Essential to Control the Outbreak [J].
Binnicker, Matthew J. .
CLINICAL CHEMISTRY, 2020, 66 (05) :664-666
[5]   Development, evaluation, and validation of machine learning models for COVID-19 detection based on routine blood tests [J].
Cabitza, Federico ;
Campagner, Andrea ;
Ferrari, Davide ;
Di Resta, Chiara ;
Ceriotti, Daniele ;
Sabetta, Eleonora ;
Colombini, Alessandra ;
De Vecchi, Elena ;
Banfi, Giuseppe ;
Locatelli, Massimo ;
Carobene, Anna .
CLINICAL CHEMISTRY AND LABORATORY MEDICINE, 2021, 59 (02) :421-431
[6]   Visualizing the Feature Importance for Black Box Models [J].
Casalicchio, Giuseppe ;
Molnar, Christoph ;
Bischl, Bernd .
MACHINE LEARNING AND KNOWLEDGE DISCOVERY IN DATABASES, ECML PKDD 2018, PT I, 2019, 11051 :655-670
[7]   The Impact of COVID-19 on Blood Glucose: A Systematic Review and Meta-Analysis [J].
Chen, Juan ;
Wu, Chunhua ;
Wang, Xiaohang ;
Yu, Jiangyi ;
Sun, Zilin .
FRONTIERS IN ENDOCRINOLOGY, 2020, 11
[8]   Molecular Diagnosis of a Novel Coronavirus (2019-nCoV) Causing an Outbreak of Pneumonia [J].
Chu, Daniel K. W. ;
Pan, Yang ;
Cheng, Samuel M. S. ;
Hui, Kenrie P. Y. ;
Krishnan, Pavithra ;
Liu, Yingzhi ;
Ng, Daisy Y. M. ;
Wan, Carrie K. C. ;
Yang, Peng ;
Wang, Quanyi ;
Peiris, Malik ;
Poon, Leo L. M. .
CLINICAL CHEMISTRY, 2020, 66 (04) :549-555
[9]   Detection of COVID-19 by Machine Learning Using Routine Laboratory Tests [J].
Cubukcu, Hikmet Can ;
Topcu, Deniz Ilhan ;
Bayraktar, Nilufer ;
Gulsen, Murat ;
Sari, Nuran ;
Arslan, Ayse Hande .
AMERICAN JOURNAL OF CLINICAL PATHOLOGY, 2022, 157 (05) :758-766
[10]   Using a national surgical database to predict complications following posterior lumbar surgery and comparing the area under the curve and F1-score for the assessment of prognostic capability [J].
DeVries, Zachary ;
Locke, Eric ;
Hoda, Mohamad ;
Moravek, Dita ;
Phan, Kim ;
Stratton, Alexandra ;
Kingwell, Stephen ;
Wai, Eugene K. ;
Phan, Philippe .
SPINE JOURNAL, 2021, 21 (07) :1135-1142