CT-Based Radiomics to Predict KRAS Mutation in CRC Patients Using a Machine Learning Algorithm: A Retrospective Study

被引:6
作者
Porto-Alvarez, Jacobo [1 ]
Cernadas, Eva [2 ]
Martinez, Rebeca Aldaz [1 ]
Fernandez-Delgado, Manuel [2 ]
Zapico, Emilio Huelga [1 ]
Gonzalez-Castro, Victor [3 ]
Baleato-Gonzalez, Sandra [1 ]
Garcia-Figueiras, Roberto [1 ]
Antunez-Lopez, J. Ramon [4 ]
Souto-Bayarri, Miguel [1 ]
机构
[1] Complexo Hosp Univ Santiago de Compostela, Dept Radiol, Santiago De Compostela 15706, Spain
[2] Univ Santiago de Compostela, Ctr Singular Invest Tecnol Intelixentes USC CiTIUS, Santiago De Compostela 15705, Spain
[3] Univ Leon, Dept Elect Syst & Automat Engn, Leon 24071, Spain
[4] Complexo Hosp Univ Santiago de Compostela, Dept Pathol, Santiago De Compostela 15706, Spain
关键词
KRAS mutation; colorectal cancer; texture analysis; radiomics; radiogenomics; METASTATIC COLORECTAL-CANCER; CLASSIFICATION; FEATURES; IMAGES;
D O I
10.3390/biomedicines11082144
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Colorectal cancer (CRC) is one of the most common types of cancer worldwide. The KRAS mutation is present in 30-50% of CRC patients. This mutation confers resistance to treatment with anti-EGFR therapy. This article aims at proving that computer tomography (CT)-based radiomics can predict the KRAS mutation in CRC patients. The piece is a retrospective study with 56 CRC patients from the Hospital of Santiago de Compostela, Spain. All patients had a confirmatory pathological analysis of the KRAS status. Radiomics features were obtained using an abdominal contrast enhancement CT (CECT) before applying any treatments. We used several classifiers, including AdaBoost, neural network, decision tree, support vector machine, and random forest, to predict the presence or absence of KRAS mutation. The most reliable prediction was achieved using the AdaBoost ensemble on clinical patient data, with a kappa and accuracy of 53.7% and 76.8%, respectively. The sensitivity and specificity were 73.3% and 80.8%. Using texture descriptors, the best accuracy and kappa were 73.2% and 46%, respectively, with sensitivity and specificity of 76.7% and 69.2%, also showing a correlation between texture patterns on CT images and KRAS mutation. Radiomics could help manage CRC patients, and in the future, it could have a crucial role in diagnosing CRC patients ahead of invasive methods.
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页数:13
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