Phenome-wide Mendelian randomisation analysis identifies causal factors for age-related macular degeneration

被引:17
|
作者
Julian, Thomas H. [1 ,2 ]
Cooper-Knock, Johnathan [3 ]
MacGregor, Stuart [4 ]
Guo, Hui [5 ]
Aslam, Tariq [2 ,6 ]
Sanderson, Eleanor [7 ]
Black, Graeme C. M. [1 ,8 ]
Sergouniotis, Panagiotis, I [1 ,2 ,8 ,9 ]
Smith, Lois E. H.
机构
[1] Univ Manchester, Fac Biol Med & Hlth, Sch Biol Sci, Div Evolut Infect & Genom, Manchester, England
[2] Manchester Univ NHS Fdn Trust, Manchester Royal Eye Hosp, Manchester, England
[3] Univ Sheffield, Sheffield Inst Translat Neurosci SITraN, Dept Neurosci, Sheffield, England
[4] QIMR Berghofer Med Res Inst, Stat Genet, Brisbane, Australia
[5] Univ Manchester, Fac Biol Med & Hlth, Div Populat Hlth Hlth Serv Res & Primary Care, Sch Hlth Sci,Ctr Biostat, Manchester, England
[6] Univ Manchester, Fac Biol Med & Hlth, Sch Hlth Sci, Div Pharm & Optometry, Manchester, England
[7] Univ Bristol, MRC Integrat Epidemiol Unit, Bristol, England
[8] Manchester Univ NHS Fdn Trust, St Marys Hosp, Manchester Ctr Genom Med, Manchester, England
[9] European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Wellcome Genome Campus, Cambridge, England
来源
ELIFE | 2023年 / 12卷
基金
英国医学研究理事会; 英国惠康基金;
关键词
age-related macular degeneration; statistics; macular degeneration; Mendelian randomisation; Mendelian randomization; causal inference; AMD; Human; COMPLEMENT-SYSTEM; FACTOR-H; ASSOCIATION; INSTRUMENTS; CLASSIFICATION; POWERFUL; RISK; BIAS; AMD;
D O I
10.7554/eLife.82546
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Age-related macular degeneration (AMD) is a leading cause of blindness in the industrialised world and is projected to affect > 280 million people worldwide by 2040. Aiming to identify causal factors and potential therapeutic targets for this common condition, we designed and undertook a phenome-wide Mendelian randomisation (MR) study.Methods: We evaluated the effect of 4591 exposure traits on early AMD using univariable MR. Statistically significant results were explored further using: validation in an advanced AMD cohort; MR Bayesian model averaging (MR-BMA); and multivariable MR.Results: Overall, 44 traits were found to be putatively causal for early AMD in univariable analysis. Serum proteins that were found to have significant relationships with AMD included S100-A5 (odds ratio [OR] = 1.07, p-value = 6.80E-06), cathepsin F (OR = 1.10, p-value = 7.16E-05), and serine palmitoyltransferase 2 (OR = 0.86, p-value = 1.00E-03). Univariable MR analysis also supported roles for complement and immune cell traits. Although numerous lipid traits were found to be significantly related to AMD, MR-BMA suggested a driving causal role for serum sphingomyelin (marginal inclusion probability [MIP] = 0.76; model-averaged causal estimate [MACE] = 0.29).Conclusions: The results of this MR study support several putative causal factors for AMD and highlight avenues for future translational research.Funding: This project was funded by the Wellcome Trust (224643/Z/21/Z; 200990/Z/16/Z); the University of Manchester's Wellcome Institutional Strategic Support Fund (Wellcome ISSF) grant (204796/Z/16/Z); the UK National Institute for Health Research (NIHR) Academic Clinical Fellow and Clinical Lecturer Programmes; Retina UK and Fight for Sight (GR586); the Australian National Health and Medical Research Council (NHMRC) (1150144).
引用
收藏
页数:19
相关论文
共 50 条
  • [1] Causal factors in primary open angle glaucoma: a phenome-wide Mendelian randomisation study
    Julian, Thomas H.
    Girach, Zain
    Sanderson, Eleanor
    Guo, Hui
    Yu, Jonathan
    Cooper-Knock, Johnathan
    Black, Graeme C.
    Sergouniotis, Panagiotis I.
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [2] Searching for causal relationships of glioma: a phenome-wide Mendelian randomisation study
    Saunders, Charlie N.
    Cornish, Alex J.
    Kinnersley, Ben
    Law, Philip J.
    Houlston, Richard S.
    Claus, Elizabeth B.
    Il'yasova, Dora
    Schildkraut, Joellen
    Barnholtz-Sloan, Jill S.
    Olson, Sara H.
    Bernstein, Jonine L.
    Lai, Rose K.
    Chanock, Stephen
    Rajaraman, Preetha
    Johansen, Christoffer
    Jenkins, Robert B.
    Melin, Beatrice S.
    Wrensch, Margaret R.
    Sanson, Marc
    Bondy, Melissa L.
    BRITISH JOURNAL OF CANCER, 2021, 124 (02) : 447 - 454
  • [3] Assessment of causal factors for Parkinson's disease in European populations: A phenome-wide Mendelian randomisation analysis
    Xue, Zhe
    Cheng, Yinyin
    Yu, Qingyao
    Wang, Tiantian
    Fan, Chuanlong
    Zou, Zuquan
    Zhang, Xiaohong
    ASIA PACIFIC JOURNAL OF CLINICAL NUTRITION, 2021, 30 (02) : 329 - 339
  • [4] The Potential Causal Association of Apolipoprotein A and B and Age-Related Macular Degeneration: A Mendelian Randomisation Study
    Lee, Young
    Seo, Je Hyun
    BIOMEDICINES, 2024, 12 (12)
  • [5] Causal Associations of Glaucoma and Age-Related Macular Degeneration with Cataract: A Bidirectional Two-Sample Mendelian Randomisation Study
    Seo, Je Hyun
    Lee, Young
    GENES, 2024, 15 (04)
  • [6] Identifying potential causal effects of age at menarche: a Mendelian randomization phenome-wide association study
    Magnus, Maria C.
    Guyatt, Anna L.
    Lawn, Rebecca B.
    Wyss, Annah B.
    Trajanoska, Katerina
    Kupers, Leanne K.
    Rivadeneira, Fernando
    Tobin, Martin D.
    London, Stephanie J.
    Lawlor, Debbie A.
    Millard, Louise A. C.
    Fraser, Abigail
    BMC MEDICINE, 2020, 18 (01)
  • [7] Identifying potential causal effects of age at menopause: a Mendelian randomization phenome-wide association study
    Magnus, Maria C.
    Borges, Maria Carolina
    Fraser, Abigail
    Lawlor, Deborah A.
    EUROPEAN JOURNAL OF EPIDEMIOLOGY, 2022, 37 (09) : 971 - 982
  • [8] Causal influence of plasma metabolites on age-related macular degeneration: A Mendelian randomization study
    Wang, Tao
    Huang, Chun
    Li, Jinshuai
    Wu, Xiangjian
    Fu, Xiaoyan
    Hu, Yimin
    Wu, Geping
    Yang, Chunfeng
    Chen, Sheng
    MEDICINE, 2024, 103 (37)
  • [9] Identifying the potential causal role of insomnia symptoms on 11,409 health-related outcomes: a phenome-wide Mendelian randomisation analysis in UK Biobank
    Gibson, Mark J.
    Lawlor, Deborah A.
    Millard, Louise A. C.
    BMC MEDICINE, 2023, 21 (01)
  • [10] Health effects of high serum calcium levels: Updated phenome-wide Mendelian randomisation investigation and review of Mendelian randomisation studies
    Yuan, Shuai
    Yu, Lili
    Gou, Wanglong
    Wang, Lijuan
    Sun, Jing
    Li, Doudou
    Lu, Ying
    Cai, Xiaxia
    Yu, Huanling
    Yuan, Changzheng
    Zheng, Ju-Sheng
    Larsson, Susanna C.
    Theodoratou, Evropi
    Li, Xue
    EBIOMEDICINE, 2022, 76