New compounds based on 1H-pyrrolo[2,3-b] pyridine as potent TNIK inhibitors against colorectal cancer cells. Molecular modeling studies

被引:4
作者
El-Mernissi, Reda [1 ]
El Khatabi, Khalil [1 ]
Khaldan, Ayoub [1 ]
Bouamrane, Soukaina [1 ]
Ajana, Mohammed Aziz [1 ]
Lakhlifi, Tahar [1 ]
Bouachrine, Mohammed [1 ,2 ]
机构
[1] Univ Moulay Ismail, Fac Sci, MCNSL, Meknes, Morocco
[2] Sultan Moulay Sliman Univ, EST Khenifra, Benimellal, Morocco
来源
MOROCCAN JOURNAL OF CHEMISTRY | 2023年 / 11卷 / 01期
关键词
Cancer; 1H-pyrrolo[2; 3-b]pyridine; 3D-QSAR; ADMET; Molecular docking; BETA-CATENIN; APC; MUTATIONS; DOCKING; 3D-QSAR;
D O I
10.48317/IMIST.PRSM/morjchem-v11i1.35380
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Cancer is a disease caused by the incorrect transformation of cells that proliferate abnormally, and it is one of the leading causes of mortality worldwide. As a result, new compounds with potential anticancer activity must be designed. In this article, three - dimensional Quantitative Structure-Activity Relationship is used to study thirty-one compounds of 1H-pyrrolo[2,3-b]pyridine derivatives as potent TNIK inhibitors against colorectal cancer cells. Their pIC50 varied from 7.37 to 9.92. The two contours, Molecular Field Analysis (CoMFA) and Comparative Molecular Similarity Indices (CoMSIA) are critical in determining the nature of the groups that enhance or reduce activity. The models CoMFA and CoMSIA indicate strong reliability with (Q(2) = 0.65; R-2 = 0.86; r(test)(2) = 0.97) and (Q(2)= 0.74; R-2 = 0. 96; r(test)(2) = 0. 95), respectively. Based on the good findings produced by the contour maps generated by the approach model, we have suggested five drugs with strong activity against colorectal cancer cells. In addition, the ADMET characteristics of these newly designed compounds were examined in silico. These compounds were further evaluated by molecular docking, showing that two molecules, Y4 and Y5, exhibit favorable interactions with the targeted receptor and a high total score. Our vision is to develop new medicines with strong TNIK inhibitory activities that target Traf2 and Nck-interacting kinase TNIK as a therapeutic target.
引用
收藏
页码:20 / 33
页数:14
相关论文
共 41 条
  • [1] 3D-QSAR, molecular docking, molecular dynamic simulation, and ADMET study of bioactive compounds against candida albicans
    Bouamrane, S.
    Khaldane, A.
    Haji, H.
    El-Mernissi, R.
    Maghat, H.
    Ajana, M. A.
    Sbai, A.
    Bouachrine, M.
    Lakhlifi, T.
    [J]. MOROCCAN JOURNAL OF CHEMISTRY, 2022, 10 (03): : 523 - +
  • [2] Discovery of TRAF-2 and NCK-interacting kinase (TNIK) inhibitors by ligand-based virtual screening methods
    Bujak, Anna
    Stefaniak, Filip
    Zdzalik, Daria
    Grygielewicz, Paulina
    Dymek, Barbara
    Zagozda, Marcin
    Gunerka, Pawel
    Lamparska-Przybysz, Monika
    Dubiel, Krzysztof
    Wieczorek, Maciej
    Dzwonek, Karolina
    [J]. MEDCHEMCOMM, 2015, 6 (08) : 1564 - 1572
  • [3] SAMPLE-DISTANCE PARTIAL LEAST-SQUARES - PLS OPTIMIZED FOR MANY VARIABLES, WITH APPLICATION TO COMFA
    BUSH, BL
    NACHBAR, RB
    [J]. JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 1993, 7 (05) : 587 - 619
  • [4] VALIDATION OF THE GENERAL-PURPOSE TRIPOS 5.2 FORCE-FIELD
    CLARK, M
    CRAMER, RD
    VANOPDENBOSCH, N
    [J]. JOURNAL OF COMPUTATIONAL CHEMISTRY, 1989, 10 (08) : 982 - 1012
  • [5] COMPARATIVE MOLECULAR-FIELD ANALYSIS (COMFA) .1. EFFECT OF SHAPE ON BINDING OF STEROIDS TO CARRIER PROTEINS
    CRAMER, RD
    PATTERSON, DE
    BUNCE, JD
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (18) : 5959 - 5967
  • [6] Cronin K. A., 2018, SYBYL X MOL MODELING, DOI [10.1002/cncr.31551, DOI 10.1002/CNCR.31551]
  • [7] SwissADME: a free web tool to evaluate pharmacokinetics, drug-likeness and medicinal chemistry friendliness of small molecules
    Daina, Antoine
    Michielin, Olivier
    Zoete, Vincent
    [J]. SCIENTIFIC REPORTS, 2017, 7
  • [8] The R-spondin/Lgr5/Rnf43 module: regulator of Wnt signal strength
    de Lau, Wim
    Peng, Weng Chuan
    Gros, Piet
    Clevers, Hans
    [J]. GENES & DEVELOPMENT, 2014, 28 (04) : 305 - 316
  • [9] DeLano WL., 2020, PYMOL
  • [10] Diass K., 2023, Indonesian Journal of Science & Technology, V8, P1, DOI DOI 10.17509/IJOST.V8I1.50737