Ancient dog DNA reveals the human livelihood mode transitions during the late Neolithic in Northeastern China

被引:2
作者
Wang, Xingcheng [1 ]
Wei, Wenqi [1 ]
Zhang, Naifan [2 ]
Zhang, Wei [3 ]
Tian, He [3 ]
Liu, Wei [3 ]
Cai, Dawei [1 ]
机构
[1] Jilin Univ, Res Ctr Chinese Frontier Archaeol, Changchun 130012, Peoples R China
[2] Natl Ctr Archaeol, Beijing 100013, Peoples R China
[3] Heilongjiang Prov Inst Cultural Rel & Archaeol, Harbin 150008, Peoples R China
关键词
ancient DNA; Honghe site; Domesticated dog; agricultural models; cultural exhange; MITOCHONDRIAL-DNA; ORIGIN; HISTORY; TOOLKIT; CATTLE;
D O I
10.1016/j.jasrep.2023.104349
中图分类号
K85 [文物考古];
学科分类号
0601 ;
摘要
The Honghe site is located in the middle reaches of the Nenjiang River in northeastern China and contains remains from the late Neolithic through the Ming and Qing dynasties. Among these remains, dogs were the only species domesticated in the Neolithic period. In this study, we analyzed the ancient DNA of 29 canine remains from the late Neolithic to the Bronze Age at the Honghe site, and the results showed that two new A subhaplogroups (A3 and A4) were found in the canines from the Honghe site compared to the ancient canines from the Yellow River Basin and the Yangtze River Basin in China. At the same time, the sex ratio of domestic dogs at the site changed between the different historical phases, which may have been influenced by a number of factors, possibly including changes in livelihood mode transitions. In addition, the discovery of dog haplotypes B and C at the site suggests that the influence of European domestic dogs reached northeast China during this period.
引用
收藏
页数:10
相关论文
共 65 条
[21]  
Horard-Herbin M. P., 2014, Animal Frontiers, V4, P23, DOI 10.2527/af.2014-0018
[22]   A new look at an old dog: Bonn-Oberkassel reconsidered [J].
Janssens, Luc ;
Giemsch, Liane ;
Schmitz, Ralf ;
Street, Martin ;
Van Dongen, Stefan ;
Crombe, Philippe .
JOURNAL OF ARCHAEOLOGICAL SCIENCE, 2018, 92 :126-138
[23]   adegenet:: a R package for the multivariate analysis of genetic markers [J].
Jombart, Thibaut .
BIOINFORMATICS, 2008, 24 (11) :1403-1405
[24]   mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters [J].
Jonsson, Hakon ;
Ginolhac, Aurelien ;
Schubert, Mikkel ;
Johnson, Philip L. F. ;
Orlando, Ludovic .
BIOINFORMATICS, 2013, 29 (13) :1682-1684
[25]   ANGSD: Analysis of Next Generation Sequencing Data [J].
Korneliussen, Thorfinn Sand ;
Albrechtsen, Anders ;
Nielsen, Rasmus .
BMC BIOINFORMATICS, 2014, 15
[26]   RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference [J].
Kozlov, Alexey M. ;
Darriba, Diego ;
Flouri, Tomas ;
Morel, Benoit ;
Stamatakis, Alexandros .
BIOINFORMATICS, 2019, 35 (21) :4453-4455
[27]   POPART: full-feature software for haplotype network construction [J].
Leigh, Jessica W. ;
Bryant, David .
METHODS IN ECOLOGY AND EVOLUTION, 2015, 6 (09) :1110-1116
[28]   Response of prehistoric human activity to environmental changes since 7,000 cal yr BP in Nenjiang River Basin, northeast China [J].
Leng, Chengcheng ;
Tang, Zhuowei ;
Zhang, Wei ;
Jie, Dongmei ;
Wang, Hainan ;
Gao, Guizai ;
Li, Dehui ;
Li, Nannan ;
Wang, Jiangyong ;
Shi, Jichen ;
Liu, Baojian ;
Liu, Xu ;
Bao, Tong .
QUATERNARY INTERNATIONAL, 2019, 507 :74-83
[29]   Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation [J].
Letunic, Ivica ;
Bork, Peer .
NUCLEIC ACIDS RESEARCH, 2021, 49 (W1) :W293-W296
[30]  
[李春香 Li Chunxiang], 2020, [人类学学报, Acta Anthropologica Sinica], V39, P695