1H, 13C, and 15N NMR chemical shift assignment of LytM N-terminal domain (residues 26-184)

被引:2
作者
Pitkanen, Ilona [1 ]
Tossavainen, Helena [1 ]
Permi, Perttu [1 ,2 ,3 ]
机构
[1] Univ Jyvaskyla, Dept Biol & Environm Sci, FI-40014 Jyvaskyla, Finland
[2] Univ Jyvaskyla, Nanosci Ctr, Dept Chem, FI-40014 Jyvaskyla, Finland
[3] Univ Helsinki, Inst Biotechnol, Helsinki Inst Life Sci, FI-00014 Helsinki, Finland
基金
芬兰科学院;
关键词
NMR spectroscopy; Ha-detection; LytM; S; aureus; STAPHYLOCOCCUS-AUREUS; BACKBONE ASSIGNMENT; PROTEINS; SPECTROSCOPY;
D O I
10.1007/s12104-023-10151-5
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Antibiotic resistance is a growing problem and a global threat for modern healthcare. New approaches complementing the traditional antibiotic drugs are urgently needed to secure the ability to treat bacterial infections also in the future. Among the promising alternatives are bacteriolytic enzymes, such as the cell wall degrading peptidoglycan hydrolases. Staphylococcus aureus LytM, a Zn2+-dependent glycyl-glycine endopeptidase of the M23 family, is one of the peptidoglycan hydrolases. It has a specificity towards staphylococcal peptidoglycan, making it an interesting target for antimicrobial studies. LytM hydrolyses the cell wall of S. aureus, a common pathogen with multi-resistant strains that are difficult to treat, such as the methicillin-resistant S. aureus, MRSA. Here we report the H-1, N-15 and C-13 chemical shift assignments of S. aureus LytM N-terminal domain and linker region, residues 26-184. These resonance assignments can provide the basis for further studies such as elucidation of structure and interactions.
引用
收藏
页码:257 / 263
页数:7
相关论文
共 29 条
  • [1] Twenty-Year Trends in Antimicrobial Susceptibilities Among Staphylococcus aureus From the SENTRY Antimicrobial Surveillance Program
    Diekema, Daniel J.
    Pfaller, Michael A.
    Shortridge, Dee
    Zervos, Marcus
    Jones, Ronald N.
    [J]. OPEN FORUM INFECTIOUS DISEASES, 2019, 6 : S47 - S53
  • [2] IUPred3: prediction of protein disorder enhanced with unambiguous experimental annotation and visualization of evolutionary conservation
    Erdos, Gabor
    Pajkos, Matyas
    Dosztanyi, Zsuzsanna
    [J]. NUCLEIC ACIDS RESEARCH, 2021, 49 (W1) : W297 - W303
  • [3] New antibiotic agents in the pipeline and how they can help overcome microbial resistance
    Gould, Ian M.
    Bal, Abhijit M.
    [J]. VIRULENCE, 2013, 4 (02) : 185 - 191
  • [4] Prevalence and Therapies of Antibiotic-Resistance in Staphylococcus aureus
    Guo, Yunlei
    Song, Guanghui
    Sun, Meiling
    Wang, Juan
    Wang, Yi
    [J]. FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2020, 10
  • [5] HACANCOi: a new Hα-detected experiment for backbone resonance assignment of intrinsically disordered proteins
    Karjalainen, Mikael
    Tossavainen, Helena
    Hellman, Maarit
    Permi, Perttu
    [J]. JOURNAL OF BIOMOLECULAR NMR, 2020, 74 (12) : 741 - 752
  • [6] PURE ABSORPTION GRADIENT ENHANCED HETERONUCLEAR SINGLE QUANTUM CORRELATION SPECTROSCOPY WITH IMPROVED SENSITIVITY
    KAY, LE
    KEIFER, P
    SAARINEN, T
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (26) : 10663 - 10665
  • [7] Medical progress -: Staphylococcus aureus infections
    Lowy, FD
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 1998, 339 (08) : 520 - 532
  • [8] HA-detected experiments for the backbone assignment of intrinsically disordered proteins
    Mantylahti, Sampo
    Aitio, Olli
    Hellman, Maarit
    Permi, Perttu
    [J]. JOURNAL OF BIOMOLECULAR NMR, 2010, 47 (03) : 171 - 181
  • [9] An intraresidual i(HCA)CO(CA)NH experiment for the assignment of main-chain resonances in 15N, 13C labeled proteins
    Mantylahti, Sampo
    Tossavainen, Helena
    Hellman, Maarit
    Permi, Perttu
    [J]. JOURNAL OF BIOMOLECULAR NMR, 2009, 45 (03) : 301 - 310
  • [10] Worldwide Epidemiology and Antibiotic Resistance of Staphylococcus aureus
    Monaco, Monica
    de Araujo, Fernanda Pimentel
    Cruciani, Melania
    Coccia, Eliana M.
    Pantosti, Annalisa
    [J]. STAPHYLOCOCCUS AUREUS: MICROBIOLOGY, PATHOLOGY, IMMUNOLOGY, THERAPY AND PROPHYLAXIS, 2017, 409 : 21 - 56