Chemical remodeling of a cellular chaperone to target the active state of mutant KRAS

被引:93
作者
Schulze, Christopher J. [1 ]
Seamon, Kyle J. [1 ]
Zhao, Yulei [2 ]
Yang, Yu C. [1 ]
Cregg, Jim [3 ]
Kim, Dongsung [2 ]
Tomlinson, Aidan [3 ]
Choy, Tiffany J. [1 ]
Wang, Zhican [4 ]
Sang, Ben [2 ]
Pourfarjam, Yasin [2 ]
Lucas, Jessica [2 ]
Cuevas-Navarro, Antonio [2 ]
Ayala-Santos, Carlos [2 ]
Vides, Alberto [2 ]
Li, Chuanchuan [2 ]
Marquez, Abby [3 ]
Zhong, Mengqi [3 ]
Vemulapalli, Vidyasiri [1 ]
Weller, Caroline [1 ]
Gould, Andrea [1 ]
Whalen, Daniel M. [3 ]
Salvador, Anthony [3 ]
Milin, Anthony [3 ]
Saldajeno-Concar, Mae [3 ]
Dinglasan, Nuntana [1 ]
Chen, Anqi [3 ]
Evans, Jim [1 ]
Knox, John E. [3 ]
Koltun, Elena S. [3 ]
Singh, Mallika [1 ]
Nichols, Robert [1 ]
Wildes, David [1 ]
Gill, Adrian L. [3 ]
Smith, Jacqueline A. M. [1 ]
Lito, Piro [2 ,5 ,6 ]
机构
[1] Revolut Med Inc, Dept Biol, Redwood City, CA 94063 USA
[2] Mem Sloan Kettering Canc Ctr, Human Oncol & Pathogenesis Program, New York, NY 10065 USA
[3] Revolut Med Inc, Dept Discovery Chem, Redwood City, CA 94063 USA
[4] Revolut Med Inc, Dept Nonclin Dev & Clin Pharmacol, Redwood City, CA 94063 USA
[5] Mem Sloan Kettering Canc Ctr, Dept Med, New York, NY 10065 USA
[6] Weill Cornell Med Coll, Dept Med, New York, NY 10065 USA
基金
美国国家卫生研究院;
关键词
KRAS(G12C) INHIBITION; CYCLOSPORINE-A; RAS ONCOGENES; CYCLOPHILIN; BINDING; CALCINEURIN; RESISTANCE;
D O I
10.1126/science.adg9652
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The discovery of small-molecule inhibitors requires suitable binding pockets on protein surfaces. Proteins that lack this feature are considered undruggable and require innovative strategies for therapeutic targeting. KRAS is the most frequently activated oncogene in cancer, and the active state of mutant KRAS is such a recalcitrant target. We designed a natural product-inspired small molecule that remodels the surface of cyclophilin A (CYPA) to create a neomorphic interface with high affinity and selectivity for the active state of KRAS(G12C) (in which glycine-12 is mutated to cysteine). The resulting CYPA:drug:KRAS(G12C) tricomplex inactivated oncogenic signaling and led to tumor regressions in multiple human cancer models. This inhibitory strategy can be used to target additional KRAS mutants and other undruggable cancer drivers. Tricomplex inhibitors that selectively target active KRAS(G12C) or multiple RAS mutants are in clinical trials now (NCT05462717 and NCT05379985).
引用
收藏
页码:794 / 799
页数:6
相关论文
共 46 条
  • [1] AACR Project GENIE: Powering Precision Medicine through an International Consortium
    Andre, Fabrice
    Arnedos, Monica
    Baras, Alexander S.
    Baselga, Jose
    Bedard, Philippe L.
    Berger, Michael F.
    Bierkens, Mariska
    Calvo, Fabien
    Cerami, Ethan
    Chakravarty, Debyani
    Dang, Kristen K.
    Davidson, Nancy E.
    Del Vecchio, Fitz Catherine
    Dogan, Semih
    DuBois, Raymond N.
    Ducar, Matthew D.
    Futreal, P. Andrew
    Gao Jianjiong
    Garcia, Francisco
    Gardos, Stu
    Gocke, Christopher D.
    Gross, Benjamin E.
    Guinney, Justin
    Heins, Zachary J.
    Hintzen, Stephanie
    Horlings, Hugo
    Hudecek, Jan
    Hyman, David M.
    Kamel-Reid, Suzanne
    Kandoth, Cyriac
    Kinyua, Walter
    Kumari, Priti
    Kundra, Ritika
    Ladanyi, Marc
    Lefebvre, Celine
    LeNoue-Newton, Michele L.
    Lepisto, Eva M.
    Levy, Mia A.
    Lindeman, Neal, I
    Lindsay, James
    Liu, David
    Lu Zhibin
    MacConaill, Laura E.
    Ian, Maurer
    Maxwell, David S.
    Meijer, Gerrit A.
    Meric-Bernstam, Funda
    Micheel, Christine M.
    Miller, Clinton
    Mills, Gordon
    [J]. CANCER DISCOVERY, 2017, 7 (08) : 818 - 831
  • [2] Acquired Resistance to KRASG12C Inhibition in Cancer
    Awad, M. M.
    Liu, S.
    Rybkin, I. I.
    Arbour, K. C.
    Dilly, J.
    Zhu, V. W.
    Johnson, M. L.
    Heist, R. S.
    Patil, T.
    Riely, G. J.
    Jacobson, J. O.
    Yang, X.
    Persky, N. S.
    Root, D. E.
    Lowder, K. E.
    Feng, H.
    Zhang, S. S.
    Haigis, K. M.
    Hung, Y. P.
    Sholl, L. M.
    Wolpin, B. M.
    Wiese, J.
    Christiansen, J.
    Lee, J.
    Schrock, A. B.
    Lim, L. P.
    Garg, K.
    Li, M.
    Engstrom, L. D.
    Waters, L.
    Lawson, J. D.
    Olson, P.
    Lito, P.
    Ou, S. -H. I.
    Christensen, J. G.
    Janne, P. A.
    Aguirre, A. J.
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2021, 384 (25) : 2382 - 2393
  • [3] Characterization of the FKBP•Rapamycin•FRB ternary complex
    Banaszynski, LA
    Liu, CW
    Wandless, TJ
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2005, 127 (13) : 4715 - 4721
  • [4] The clinical KRAS(G12C) inhibitor AMG 510 drives anti-tumour immunity
    Canon, Jude
    Rex, Karen
    Saiki, Anne Y.
    Mohr, Christopher
    Cooke, Keegan
    Bagal, Dhanashri
    Gaida, Kevin
    Holt, Tyler
    Knutson, Charles G.
    Koppada, Neelima
    Lanman, Brian A.
    Werner, Jonathan
    Rapaport, Aaron S.
    San Miguel, Tisha
    Ortiz, Roberto
    Osgood, Tao
    Sun, Ji-Rong
    Zhu, Xiaochun
    McCarter, John D.
    Volak, Laurie P.
    Houk, Brett E.
    Fakih, Marwan G.
    O'Neil, Bert H.
    Price, Timothy J.
    Falchook, Gerald S.
    Desai, Jayesh
    Kuo, James
    Govindan, Ramaswamy
    Hong, David S.
    Ouyang, Wenjun
    Henary, Haby
    Arvedson, Tara
    Cee, Victor J.
    Lipford, J. Russell
    [J]. NATURE, 2019, 575 (7781) : 217 - +
  • [5] Chakravarty D, 2017, JCO PRECIS ONCOL, V1
  • [6] Biochemical and structural characterization of a divergent loop cyclophilin from Caenorhabditis elegans
    Dornan, J
    Page, AP
    Taylor, P
    Wu, SY
    Winter, AD
    Husi, H
    Walkinshaw, MD
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (49) : 34877 - 34883
  • [7] Features and development of Coot
    Emsley, P.
    Lohkamp, B.
    Scott, W. G.
    Cowtan, K.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2010, 66 : 486 - 501
  • [8] Hidden alternative structures of proline isomerase essential for catalysis
    Fraser, James S.
    Clarkson, Michael W.
    Degnan, Sheena C.
    Erion, Renske
    Kern, Dorothee
    Alber, Tom
    [J]. NATURE, 2009, 462 (7273) : 669 - U149
  • [9] Rapamycin-inspired macrocycles with new target specificity
    Guo, Zufeng
    Hong, Sam Y.
    Wang, Jingxin
    Rehan, Shahid
    Liu, Wukun
    Peng, Hanjing
    Das, Manisha
    Li, Wei
    Bhat, Shridhar
    Peiffer, Brandon
    Ullman, Brett R.
    Tse, Chung-Ming
    Tarmakova, Zlatina
    Schiene-Fischer, Cordelia
    Fischer, Gunter
    Coe, Imogen
    Paavilainen, Ville O.
    Sun, Zhaoli
    Liu, Jun O.
    [J]. NATURE CHEMISTRY, 2019, 11 (03) : 254 - 263
  • [10] The KRASG12C Inhibitor MRTX849 Provides Insight toward Therapeutic Susceptibility of KRAS-Mutant Cancers in Mouse Models and Patients
    Hallin, Jill
    Engstrom, Lars D.
    Hargis, Lauren
    Calinisan, Andrew
    Aranda, Ruth
    Briere, David M.
    Sudhakar, Niranjan
    Bowcut, Vickie
    Baer, Brian R.
    Ballard, Joshua A.
    Burkard, Michael R.
    Fell, Jay B.
    Fischer, John P.
    Vigers, Guy P.
    Xue, Yaohua
    Gatto, Sole
    Fernandez-Banet, Julio
    Pavlicek, Adam
    Velastagui, Karen
    Chao, Richard C.
    Barton, Jeremy
    Pierobon, Mariaelena
    Baldelli, Elisa
    Patricoin, Emanuel F., III
    Cassidy, Douglas P.
    Marx, Matthew A.
    Rybkin, Igor I.
    Johnson, Melissa L.
    Ou, Sai-Hong Ignatius
    Lito, Piro
    Papadopoulos, Kyriakos P.
    Janne, Pasi A.
    Olson, Peter
    Christensen, James G.
    [J]. CANCER DISCOVERY, 2020, 10 (01) : 54 - 71