Two-step particle swarm optimization algorithm for effective deconvolution and resolution enhancement of various overlapping peaks

被引:5
作者
Ji, Xiaoli [1 ,2 ]
Liu, Rong [1 ,2 ]
Hao, Jie [1 ,3 ]
Wang, Chenlu [1 ,2 ]
Li, Junhui [1 ,3 ,4 ]
Gao, Wenqing [1 ,2 ]
Yu, Jiancheng [1 ,3 ,4 ]
Tang, Keqi [1 ,2 ,5 ]
机构
[1] Ningbo Univ, Inst Mass Spectrometry, Zhejiang Engn Res Ctr Adv Mass Spectrometry & Clin, Ningbo, Peoples R China
[2] Ningbo Univ, Sch Mat Sci & Chem Engn, Ningbo, Peoples R China
[3] Ningbo Univ, Fac Elect Engn & Comp Sci, Ningbo, Peoples R China
[4] Ningbo Univ, Fac Elect Engn & Comp Sci, Ningbo 315211, Peoples R China
[5] Ningbo Univ, Sch Mat Sci & Chem Engn, Ningbo 315211, Peoples R China
基金
中国国家自然科学基金;
关键词
ION MOBILITY SPECTROMETRY; MASS-SPECTROMETRY; DESIGN; QUANTIFICATION; SENSITIVITY;
D O I
10.1002/rcm.9429
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
RationaleThe existing particle swarm optimization (PSO) algorithms are only effective in deconvoluting the overlapping peaks in ion mobility spectra with fewer than four component peaks, which limits the applicability of these algorithms. MethodsA high-performance two-step particle swarm optimization (TSPSO) algorithm was developed. Compared to the existing PSO algorithms, TSPSO can narrow the search ranges of all coefficients for the overlapping peaks through Gaussian model calculation, and thus can deconvolute various overlapping peaks with high accuracy, even for 30-component overlapping peaks. In addition, the TSPSO could be further applied to enhance the resolution of the spectra by narrowing the peak widths after the peak deconvolution. ResultsSimulated overlapping peaks were first used to evaluate the performance of TSPSO as compared to the dynamic inertia weight particle swarm optimization (DIWPSO) algorithm. The results showed that the profiles of the peaks deconvoluted by using TSPSO were more consistent with the original ones. The fitness values and the standard deviations of the fitness values from TSPSO were also at least an order of magnitude less than those from DIWPSO. By applying TSPSO, the overlapping peaks from both mass spectrometry (MS) and field asymmetric waveform ion mobility spectrometry (FAIMS) spectra can also be well deconvoluted. In addition, the resolutions of the MS and FAIMS spectra can be effectively enhanced after peak deconvolution. The enhanced spectra matched excellently with the experimental ones acquired at high-resolution modes. ConclusionsThe experiment results convincingly demonstrate that the TSPSO algorithm is capable of both deconvoluting complex overlapping peaks and enhancing the spectrum resolution with high accuracy.
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页数:11
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