Halobacillus salinarum sp. nov., Halobacillus shinanisalinarum sp. nov. and Halobacillus amylolyticus sp. nov., isolated from saltern soil

被引:1
作者
Kim, Yiseul [1 ]
Kim, Seunghwan [1 ]
Kwon, Soon-Wo [1 ]
Weon, Hang-Yeon [1 ]
Naito, Hanako [2 ]
Asano, Tomomi [2 ]
Hamada, Moriyuki [2 ]
Heo, Jun [1 ]
机构
[1] Natl Inst Agr Sci, Rural Dev Adm, Agr Microbiol Div, Jeollabuk Do 55365, South Korea
[2] Natl Inst Technol & Evaluat, NITE Biol Resource Ctr NBRC, 2-5-8 Kazusakamatari, Kisarazu, Chiba 2920818, Japan
关键词
Halobacillus salinarum sp. nov; Halobacillus shinanisalinarum sp. nov; saltern; soil; MARINE SOLAR SALTERN; PEPTIDOGLYCAN; TAXONOMY; ACID; SEA;
D O I
10.1099/ijsem.0.006098
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Three bacterial strains, designated SSBR10- 3T, SSTM10-2T and SSHM10- 5T, were isolated from saltern soil sampled in Jeollanam- do, Republic of Korea. Cells were aerobic, Gram- stain-positive, flagellated and rod-shaped. The strains grew optimally at 28 degrees C and at pH 7.0. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strains SSBR10- 3T, SSTM102T and SSHM10- 5T were placed within the genus Halobacillus, showing the highest similarity to Halobacillus alkaliphilus FP5T (98.6 %), 'Halobacillus ihumii' Marseille-Q1234T (98.5 %) and Halobacillus locisalis MSS-155T (98.6 %), respectively. The genomic similarity values between strains SSBR10- 3T, SSTM10-2T and SSHM10- 5T and their related species were 17.6-22.6 % for digital DNA-DNA hybridization (dDDH) and 69.6-78.5 % for orthologous average nucleotide identity (OrthoANI), which were lower than the thresholds recommended for species delineation. The dDDH and OrthoANI values among the three strains were below 38.3 and 89.4 %, respectively. Besides the differences in genomic features, strains SSBR10- 3T, SSTM10-2T and SSHM10- 5T were distinct from each other and from members of the genus in terms of phenotypic traits related to substrate assimilation. The cell -wall peptidoglycan contained meso- diaminopimelic acid, the major fatty acids were anteisoC15:0, iso-C16: 0 and anteisoC17:0, and the predominant menaquinone was MK -7 for all three strains. Diphosphatidylglycerol, phosphatidylglycerol and an unidentified phospholipid were present in their polar lipid profiles. Based on a polyphasic approach incorporating genomic data, strains SSBR10- 3T, SSTM10-2T and SSHM10- 5T represent novel species, for which the names Halobacillus salinarum sp. nov. (SSBR10- 3T=DSM 114353T=KACC 21935T=NBRC 115504T), Halobacillus shinanisalinarum sp. nov. (SSTM10- 2T=DSM 114354T=KACC 21936T=NBRC 115505T) and Halobacillus amylolyticus sp. nov. (SSHM10- 5T=DSM 114355T= KACC 21937T=NBRC 115506T) are proposed.
引用
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页数:10
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  • [41] Halobacillus seohaensis sp nov., isolated from a marine solar saltern in Korea
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    Kang, So-Jung
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    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 : 622 - 627
  • [42] Halobacillus campisalis sp nov., containing diaminopimelic acid in the cell-wall peptidoglycan, and emended description of the genus Halobacillus
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    Kang, So-Jung
    Jung, Yong-Taek
    Oh, Tae-Kwang
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 2021 - 2025
  • [43] Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
    Yoon, Seok-Hwan
    Ha, Sung-Min
    Kwon, Soonjae
    Lim, Jeongmin
    Kim, Yeseul
    Seo, Hyungseok
    Chun, Jongsik
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (05) : 1613 - 1617
  • [44] The protective role of glycine betaine in Lactobacillus plantarum ST-III against salt stress
    Zhao, Shanshan
    Zhang, Qiuxiang
    Hao, Guangfei
    Liu, Xiaoming
    Zhao, Jianxin
    Chen, Yongquan
    Zhang, Hao
    Chen, Wei
    [J]. FOOD CONTROL, 2014, 44 : 208 - 213