Link between m6A modification and infiltration characterization of tumor microenvironment in lung adenocarcinoma

被引:1
作者
Yang, Sha [1 ]
Li, Ke [2 ]
Zhang, Jiqin [3 ]
Liu, Jian [4 ]
Liu, Lin [2 ]
Tan, Ying [4 ,5 ]
Xu, Chuan [5 ]
机构
[1] Guizhou Univ, Med Coll, Guiyang 550025, Peoples R China
[2] Guizhou Prov Peoples Hosp, Dept Resp & Crit Care Med, Guiyang 550002, Peoples R China
[3] Guizhou Prov Peoples Hosp, Dept Anesthesiol, Guiyang 550002, Peoples R China
[4] Guizhou Prov Peoples Hosp, Dept Neurosurg, Guiyang 550002, Peoples R China
[5] Guizhou Prov Peoples Hosp, Dept Thorac Surg, Guiyang 550002, Peoples R China
基金
中国国家自然科学基金; 美国国家科学基金会;
关键词
m6A; tumor microenvironment; stroma; lung adenocarcinoma; tumor somatic mutation; immunotherapy; CANCER; RNA; CARCINOMA; PACKAGE;
D O I
10.1177/15353702231214266
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
N6-methyladenosine (m6A) RNA methylation plays a pivotal role in immune responses and the onset and advancement of cancer. Nonetheless, the precise impact of m6A modification in lung adenocarcinoma (LUAD) and its associated tumor microenvironment (TME) remains to be fully elucidated. Here, we distinguished distinct m6A modification patterns within two separate LUAD cohorts using a set of 21 m6A regulators. The TME characteristics associated with these two patterns align with the immune-inflamed and immune-excluded phenotypes, respectively. We identified 2064 m6A-related genes, which were used as a basis to divide all LUAD samples into three distinct m6A gene clusters. We applied a scoring system to evaluate the m6A gene signature of the m6A modification pattern in individual patients. To authenticate the categorization significance of m6A modification patterns, we established a correlation between m6A score and TME infiltration profiling, tumor somatic mutations, and responses to immunotherapy. A high level of m6A modification may be associated with the aggressiveness and poor prognosis of LUAD. Further studies should investigate the mechanism of action of m6A regulators and m6A-related genes to improve the diagnosis and treatment of patients with LUAD.
引用
收藏
页码:2273 / 2288
页数:16
相关论文
共 50 条
  • [31] A signature based on m6A pattern and tumor microenvironment infiltration in clear cell renal cell carcinoma
    Yang, Chen
    Yu, Tian
    Li, Qingwen
    Xie, Fang
    Lin, Qin
    AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH, 2022, 14 (07): : 4931 - +
  • [32] The interaction between m6A modification and noncoding RNA in tumor microenvironment on cancer progression
    Wei, Liushan
    Liu, Shun
    Xie, Zhizhong
    Tang, Guotao
    Lei, Xiaoyong
    Yang, Xiaoyan
    INTERNATIONAL IMMUNOPHARMACOLOGY, 2024, 140
  • [33] NPM1 Is a Prognostic Biomarker Involved in Immune Infiltration of Lung Adenocarcinoma and Associated With m6A Modification and Glycolysis
    Liu, Xu-Sheng
    Zhou, Lu-Meng
    Yuan, Ling-Ling
    Gao, Yan
    Kui, Xue-Yan
    Liu, Xiao-Yu
    Pei, Zhi-Jun
    FRONTIERS IN IMMUNOLOGY, 2021, 12
  • [34] Identification of necroptosis-related signature and tumor microenvironment infiltration characteristics in lung adenocarcinoma
    Liu, Taisheng
    Guo, Liyi
    Liu, Guihong
    Dai, Zili
    Wang, Li
    Lin, Baisheng
    Hu, Xiaoshan
    Wang, Jian
    Zhang, Jian
    LUNG CANCER, 2022, 172 : 75 - 85
  • [35] m6A Regulator-Mediated Tumour Infiltration and Methylation Modification in Cervical Cancer Microenvironment
    Zhang, Wenyi
    Xiao, Pei
    Tang, Jiayi
    Wang, Rui
    Wang, Xiangdong
    Wang, Fengxu
    Ruan, Junpu
    Yu, Shali
    Tang, Juan
    Huang, Rongrong
    Zhao, Xinyuan
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [36] Characteristic of molecular subtypes in lung adenocarcinoma based on m6A RNA methylation modification and immune microenvironment
    Hao Zhou
    Miaosen Zheng
    Muqi Shi
    Jinjie Wang
    Zhanghao Huang
    Haijian Zhang
    Youlang Zhou
    Jiahai Shi
    BMC Cancer, 21
  • [37] Comprehensive analysis of m6A regulator signature for prediction of prognosis and immune cell infiltration in lung adenocarcinoma
    Zhang, J-Z.
    Bai, S-H.
    Yan, Y-L.
    Kang, H-J.
    Li, G-Z.
    Feng, Z-D.
    Ma, W.
    Wang, X.
    Ren, J.
    JOURNAL OF BIOLOGICAL REGULATORS AND HOMEOSTATIC AGENTS, 2022, 36 (02) : 255 - 268
  • [38] Characteristic of molecular subtypes in lung adenocarcinoma based on m6A RNA methylation modification and immune microenvironment
    Zhou, Hao
    Zheng, Miaosen
    Shi, Muqi
    Wang, Jinjie
    Huang, Zhanghao
    Zhang, Haijian
    Zhou, Youlang
    Shi, Jiahai
    BMC CANCER, 2021, 21 (01)
  • [39] Comprehensive landscape of m6A regulator-related gene patterns and tumor microenvironment infiltration characterization in gastric cancer
    Peng, Bin
    Lin, Yinglin
    Yi, Gao
    Lin, Mingzhen
    Xiao, Yao
    Qiu, Yezhenghong
    Yao, Wenxia
    Zhou, Xinke
    Liu, Zhaoyu
    SCIENTIFIC REPORTS, 2024, 14 (01):
  • [40] Crosstalk between N6-methyladenosine (m6A) modification and noncoding RNA in tumor microenvironment
    Wang, Dan
    Han, Yingying
    Peng, Lushan
    Huang, Tao
    He, Xiaoyun
    Wang, Junpu
    Ou, Chunlin
    INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES, 2023, 19 (07): : 2198 - 2219