The role of APOBEC3B in lung tumor evolution and targeted cancer therapy resistance

被引:25
|
作者
Caswell, Deborah R. [1 ]
Gui, Philippe [2 ]
Mayekar, Manasi K. [2 ]
Law, Emily K. [3 ]
Pich, Oriol [1 ]
Bailey, Chris [1 ]
Boumelha, Jesse [4 ]
Kerr, D. Lucas [2 ]
Blakely, Collin M. [2 ]
Manabe, Tadashi [2 ]
Martinez-Ruiz, Carlos [5 ,6 ]
Bakker, Bjorn [1 ]
Villcas, Juan De Dios Palomino [7 ]
I. Vokes, Natalie [8 ,9 ]
Dietzen, Michelle [1 ,5 ,6 ]
Angelova, Mihaela [1 ]
Gini, Beatrice [2 ]
Tamaki, Whitney [2 ]
Allegakoen, Paul [2 ]
Wu, Wei [2 ]
Humpton, Timothy J. [10 ,11 ,12 ]
Hill, William [1 ]
Tomaschko, Mona [4 ]
Lu, Wei-Ting [1 ]
Haderk, Franziska [2 ]
Al Bakir, Maise [1 ]
Nagano, Ai [1 ]
Gimeno-Valiente, Francisco [6 ]
Trecesson, Sophie de Carne [4 ]
Vendramin, Roberto [1 ]
Barbe, Vittorio [1 ]
Mugabo, Miriam [6 ]
Weeden, Clare E. [1 ]
Rowan, Andrew [1 ]
McCoach, Caroline E. [13 ]
Almeida, Bruna [14 ,15 ]
Green, Mary [16 ]
Gomez, Carlos [2 ]
Nanjo, Shigeki [2 ]
Barbosa, Dora [2 ]
Moore, Chris [4 ]
Przewrocka, Joanna [1 ]
Black, James R. M. [1 ,5 ,6 ]
Gronroos, Eva [1 ]
Suarez-Bonnet, Alejandro [16 ,17 ]
Priestnall, Simon L. [16 ,17 ]
Zverev, Caroline [18 ]
Lighterness, Scott [18 ]
Cormack, James [18 ]
Olivas, Victor [2 ]
机构
[1] Francis Crick Inst, Canc Evolut & Genome Instabil Lab, London, England
[2] Univ Calif San Francisco, Dept Med, San Francisco, CA USA
[3] Univ Minnesota, Dept Biochem Mol Biol & Biophys, Minneapolis, MN USA
[4] Francis Crick Inst, Oncogene Biol Lab, London, England
[5] UCL, Canc Genome Evolut Res Grp, Canc Inst, London, England
[6] UCL Canc Inst, Canc Res UK Lung Canc Ctr Excellence, London, England
[7] Core Res Lab, ISPRO, Florence, Italy
[8] Univ Texas MD Anderson Canc Ctr, Dept Thorac & Head & Neck Med Oncol, Houston, TX USA
[9] Univ Texas MD Anderson Canc Ctr, Dept Genom Med, Houston, TX USA
[10] Francis Crick Inst, P53 & Metab Lab, London, England
[11] CRUK Beatson Inst, Glasgow City, Scotland
[12] Glasgow Caledonian Univ, Glasgow City, Scotland
[13] Genentech Inc, South San Francisco, CA USA
[14] Fdn Liver Res, Roger Williams Inst Hepatol, London, England
[15] Kings Coll London, Fac Life Sci & Med, London, England
[16] Francis Crick Inst, Expt Histopathol, London, England
[17] Royal Vet Coll, Dept Pathobiol & Populat Sci, London, England
[18] Francis Crick Inst, Biol Res Facil, London, England
[19] Cursorless, London, England
[20] Novogene Europe, Dept Geog, Cambridge, England
[21] UCL, Inst Struct & Mol Biol, London, England
[22] Univ Texas Hlth San Antonio, Dept Biochem & Struct Biol, San Antonio, TX USA
[23] Univ Minnesota, Inst Hlth Informat, Minneapolis, MN USA
[24] Univ Minnesota, Masonic Canc Ctr, Minneapolis, MN USA
[25] Univ Minnesota, Sch Dent, Minneapolis, MN USA
[26] Ohio State Univ, Coll Dent, Columbus, OH USA
[27] Sutter Hlth Palo Alto Med Fdn, Dept Pulm & Crit Care, Mountain View, CA USA
[28] Dana Farber Canc Inst, Lowe Ctr Thorac Oncol, Boston, MA USA
[29] Thorac & GI Malignancies Branch, NCI, NIH, Bethesda, MD USA
[30] NextCure INc, Beltsville, MD USA
[31] NCI, NIH, Ctr Canc Res, Dev Therapeut Branch, Bethesda, MD USA
[32] Univ Calif San Francisco, Biomed Sci Program, San Francisco, CA USA
[33] Univ Minnesota, Dept Obstet Gynecol & Womens Hlth, Minneapolis, MN USA
[34] European Inst Oncol, IRCCS, Div Early Drug Dev Innovat Therapy, Milan, Italy
[35] Mem Sloan Kettering Canc Ctr, Dept Pathol, New York, NY USA
[36] Mem Sloan Kettering Canc Ctr, New York, NY USA
[37] Weill Cornell Coll Med, Dept Med, New York, NY USA
[38] Mem Sloan Kettering Canc Ctr, Human Oncol & Pathogenesis Program, New York, NY USA
[39] Mem Sloan Kettering Canc Ctr, Dept Radiat Oncol, New York, NY USA
[40] Univ Coll London Canc Inst, Canc Metastasis Lab, London, England
[41] Univ Coll London Hosp, Dept Med Oncol, London, England
[42] Dana Farber Canc Inst, Dept Med Oncol, Boston, MA USA
[43] Univ Texas Hlth San Antonio, Howard Hughes Med Inst, San Antonio, TX USA
[44] Univ Calif San Francisco, Helen Diller Family Comprehens Canc Ctr, Dept Med & Cellular & Mol Pharmacol, San Francisco, CA 94115 USA
[45] Chan Zuckerberg Biohub, San Francisco, CA 94158 USA
基金
英国国家替代、减少和改良动物研究中心; 英国惠康基金; 英国医学研究理事会; 欧洲研究理事会;
关键词
TYROSINE PHOSPHATASE PTPRD; NF-KAPPA-B; MUTATIONAL PROCESSES; KINASE INHIBITOR; DOMAIN MUTATIONS; MOUSE MODELS; EGFR; EXPRESSION; GROWTH; MUTAGENESIS;
D O I
10.1038/s41588-023-01592-8
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In this study, the impact of the apolipoprotein B mRNA-editing catalytic subunit-like (APOBEC) enzyme APOBEC3B (A3B) on epidermal growth factor receptor (EGFR)-driven lung cancer was assessed. A3B expression in EGFR mutant (EGFRmut) non-small-cell lung cancer (NSCLC) mouse models constrained tumorigenesis, while A3B expression in tumors treated with EGFR-targeted cancer therapy was associated with treatment resistance. Analyses of human NSCLC models treated with EGFR-targeted therapy showed upregulation of A3B and revealed therapy-induced activation of nuclear factor kappa B (NF-kappa B) as an inducer of A3B expression. Significantly reduced viability was observed with A3B deficiency, and A3B was required for the enrichment of APOBEC mutation signatures, in targeted therapy-treated human NSCLC preclinical models. Upregulation of A3B was confirmed in patients with NSCLC treated with EGFR-targeted therapy. This study uncovers the multifaceted roles of A3B in NSCLC and identifies A3B as a potential target for more durable responses to targeted cancer therapy. Analyses of in vivo models, cell lines and patient-derived samples show that apolipoprotein B mRNA-editing catalytic subunit 3B (APOBEC3B) not only restrains lung tumor initiation but also that its upregulation is associated with resistance to targeted therapies. This study highlights the complex and context-dependent role of APOBEC3B in lung cancer.
引用
收藏
页码:60 / 73
页数:38
相关论文
共 50 条
  • [1] The role of APOBEC3B in chondrosarcoma
    Jin, Zhe
    Han, Ya-Xin
    Han, Xiao-Rui
    ONCOLOGY REPORTS, 2014, 32 (05) : 1867 - 1872
  • [2] APOBEC3B deletion polymorphism and lung cancer risk in the southern Chinese population
    Ben, Xiaosong
    Tian, Dan
    Liang, Jiayu
    Wu, Min
    Xie, Fan
    Zheng, Jinlong
    Chen, Jingmin
    Fei, Qiaoyuan
    Guo, Xinrong
    Weng, Xueqiong
    Liu, Shan
    Xie, Xin
    Ying, Yuting
    Qiao, Guibin
    Jing, Chunxia
    ANNALS OF TRANSLATIONAL MEDICINE, 2021, 9 (08)
  • [3] Protein kinase A inhibits tumor mutator APOBEC3B through phosphorylation
    Matsumoto, Tadahiko
    Shirakawa, Kotaro
    Yokoyama, Masaru
    Fukuda, Hirofumi
    Sarca, Anamaria Daniela
    Koyabu, Sukenao
    Yamazaki, Hiroyuki
    Kazuma, Yasuhiro
    Matsui, Hiroyuki
    Maruyama, Wataru
    Nagata, Kayoko
    Tanabe, Fumiko
    Kobayashi, Masayuki
    Shindo, Keisuke
    Morishita, Ryo
    Sato, Hironori
    Takaori-Kondo, Akifumi
    SCIENTIFIC REPORTS, 2019, 9 (1)
  • [4] Mutational impact of APOBEC3A and APOBEC3B in a human cell line and comparisons to breast cancer
    Carpenter, Michael A.
    Temiz, Nuri A.
    Ibrahim, Mahmoud A.
    Jarvis, Matthew C.
    Brown, Margaret R.
    Argyris, Prokopios P.
    Brown, William L.
    Starrett, Gabriel J.
    Yee, Douglas
    Harris, Reuben S.
    PLOS GENETICS, 2023, 19 (11):
  • [5] DNA replication stress: a source of APOBEC3B expression in breast cancer
    Cescon, David W.
    Haibe-Kains, Benjamin
    GENOME BIOLOGY, 2016, 17
  • [6] The DNA cytosine deaminase APOBEC3B promotes tamoxifen resistance in ER-positive breast cancer
    Law, Emily K.
    Sieuwerts, Anieta M.
    LaPara, Kelly
    Leonard, Brandon
    Starrett, Gabriel J.
    Molan, Amy M.
    Temiz, Nuri A.
    Vogel, Rachel Isaksson
    Meijer-van Gelder, Marion E.
    Sweep, Fred C. G. J.
    Span, Paul N.
    Foekens, John A.
    Martens, John W. M.
    Yee, Douglas
    Harris, Reuben S.
    SCIENCE ADVANCES, 2016, 2 (10):
  • [7] Increased APOBEC3B Predicts Worse Outcomes in Lung Cancer: A Comprehensive Retrospective Study
    Yan, Shumei
    He, Fan
    Gao, Bei
    Wu, Huini
    Li, Mei
    Huang, Liyun
    Liang, Jianzhong
    Wu, Qiuliang
    Li, Yong
    JOURNAL OF CANCER, 2016, 7 (06): : 618 - 625
  • [8] Human APOBEC3B promotes tumor development in vivo including signature mutations and metastases
    Durfee, Cameron
    Temiz, Nuri Alpay
    Levin-Klein, Rena
    Argyris, Prokopios P.
    Alsoe, Lene
    Carracedo, Sergio
    de la Vega, Alicia Alonso
    Proehl, Joshua
    Holzhauer, Anna M.
    Seeman, Zachary J.
    Liu, Xingyu
    Lin, Yu-Hsiu T.
    Vogel, Rachel I.
    Sotillo, Rocio
    Nilsen, Hilde
    Harris, Reuben S.
    CELL REPORTS MEDICINE, 2023, 4 (10)
  • [9] APOBEC3B expression and its prognostic potential in breast cancer
    Mao, Yan
    Lv, Meng
    Zhang, Yuzi
    Nie, Gang
    Cui, Jian
    Wang, Yongmei
    Wang, Yuanyuan
    Cao, Weihong
    Liu, Xiaoyi
    Wang, Xingang
    Wang, Haibo
    ONCOLOGY LETTERS, 2020, 19 (04) : 3205 - 3214
  • [10] The APOBEC3B cytidine deaminase is an adenovirus restriction factor
    Lejeune, Noemie
    Mathieu, Sarah A.
    Decloux, Alexandra F.
    Poulain, Florian
    Blockx, Zoe F.
    Raymond, Kyle
    Willemart, Kevin F.
    Vartanian, Jean-Pierre
    Suspene, Rodolphe F.
    Gillet, Nicolas
    PLOS PATHOGENS, 2023, 19 (02)