A time independent least squares algorithm for parameter identification of Turing patterns in reaction-diffusion systems

被引:7
作者
Chang, Lili [1 ,2 ]
Wang, Xinyu [3 ,4 ]
Sun, Guiquan [2 ,5 ]
Wang, Zhen [3 ,4 ]
Jin, Zhen [1 ,2 ]
机构
[1] Shanxi Univ, Complex Syst Res Ctr, Taiyuan 030006, Peoples R China
[2] Minist Educ, Key Lab Complex Syst & Data Sci, Taiyuan 030006, Peoples R China
[3] Northwestern Polytech Univ, Sch Mech Engn, Xian 710072, Peoples R China
[4] Northwestern Polytech Univ, Sch Artificial Intelligence Opt & Elect iOPEN, Xian 710072, Peoples R China
[5] North Univ China, Dept Math, Taiyuan 030051, Peoples R China
基金
中国国家自然科学基金;
关键词
Time independence; Least squares; Parameter identification; Turing patterns; Reaction-diffusion systems; INSTABILITY; MODEL; DYNAMICS;
D O I
10.1007/s00285-023-02026-z
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Turing patterns arising from reaction-diffusion systems such as epidemic, ecology or chemical reaction models are an important dynamic property. Parameter identification of Turing patterns in spatial continuous and networked reaction-diffusion systems is an interesting and challenging inverse problem. The existing algorithms require huge account operations and resources. These drawbacks are amplified when apply them to reaction-diffusion systems on large-scale complex networks. To overcome these shortcomings, we present a new least squares algorithm which is rooted in the fact that Turing patterns are the stationary solutions of reaction-diffusion systems. The new algorithm is time independent, it translates the parameter identification problem into a low dimensional optimization problem even a low order linear algebra equations. The numerical simulations demonstrate that our algorithm has good effectiveness, robustness as well as performance.
引用
收藏
页数:18
相关论文
共 41 条
[1]   Tune the topology to create or destroy patterns [J].
Asllani, Malbor ;
Carletti, Timoteo ;
Fanelli, Duccio .
EUROPEAN PHYSICAL JOURNAL B, 2016, 89 (12)
[2]   Turing patterns in multiplex networks [J].
Asllani, Malbor ;
Busiello, Daniel M. ;
Carletti, Timoteo ;
Fanelli, Duccio ;
Planchon, Gwendoline .
PHYSICAL REVIEW E, 2014, 90 (04)
[3]   The theory of pattern formation on directed networks [J].
Asllani, Malbor ;
Challenger, Joseph D. ;
Pavone, Francesco Saverio ;
Sacconi, Leonardo ;
Fanelli, Duccio .
NATURE COMMUNICATIONS, 2014, 5
[4]   Sparse Optimal Control of the Schlogl and FitzHugh-Nagumo Systems [J].
Casas, Eduardo ;
Ryll, Christopher ;
Troeltzsch, Fredi .
COMPUTATIONAL METHODS IN APPLIED MATHEMATICS, 2013, 13 (04) :415-442
[5]   EXPERIMENTAL-EVIDENCE OF A SUSTAINED STANDING TURING-TYPE NONEQUILIBRIUM CHEMICAL-PATTERN [J].
CASTETS, V ;
DULOS, E ;
BOISSONADE, J ;
DEKEPPER, P .
PHYSICAL REVIEW LETTERS, 1990, 64 (24) :2953-2956
[6]   SPARSE OPTIMAL CONTROL OF PATTERN FORMATIONS FOR AN SIR REACTION-DIFFUSION EPIDEMIC MODEL [J].
Chang, Lili ;
Gong, Wei ;
Jin, Zhen ;
Sun, Gui-Quan .
SIAM JOURNAL ON APPLIED MATHEMATICS, 2022, 82 (05) :1764-1790
[7]   The qualitative and quantitative relationships between pattern formation and average degree in networked reaction-diffusion systems [J].
Chang, Lili ;
Guo, Luyao ;
Liu, Chen ;
Wang, Zhen ;
Sun, Guiquan .
CHAOS, 2022, 32 (09)
[8]   Optimal control of pattern formations for an SIR reaction-diffusion epidemic model [J].
Chang, Lili ;
Gao, Shupeng ;
Wang, Zhen .
JOURNAL OF THEORETICAL BIOLOGY, 2022, 536
[9]   Cross-diffusion-induced patterns in an SIR epidemic model on complex networks [J].
Chang, Lili ;
Duan, Moran ;
Sun, Guiquan ;
Jin, Zhen .
CHAOS, 2020, 30 (01)
[10]   Delay-induced patterns in a predator-prey model on complex networks with diffusion [J].
Chang, Lili ;
Liu, Chen ;
Sun, Guiquan ;
Wang, Zhen ;
Jin, Zhen .
NEW JOURNAL OF PHYSICS, 2019, 21 (07)