Association of Subjective and Objective Measures of Sleep With Gut Microbiota Composition and Diversity in Older Men: The Osteoporotic Fractures in Men Study

被引:11
作者
Estaki, Mehrbod [1 ]
Langsetmo, Lisa [2 ]
Shardell, Michelle [3 ]
Mischel, Anna [4 ]
Jiang, Lingjing [5 ]
Zhong, Yuan [6 ]
Kaufmann, Christopher [7 ]
Knight, Rob [8 ,9 ,10 ,11 ]
Stone, Katie [12 ,13 ]
Kado, Deborah [14 ,15 ]
机构
[1] Univ Calgary, Cumming Sch Med, Calgary, AB, Canada
[2] Minneapolis VA Hlth Care Syst, Ctr Care Delivery & Outcomes Res, Minneapolis, MN USA
[3] Univ Maryland, Inst Genome Sci, Sch Med, Baltimore, MD USA
[4] Univ Calif San Diego, Sch Med, La Jolla, CA USA
[5] Janssen Res & Dev Los Angeles, Los Angeles, CA USA
[6] Univ Michigan, Dept Biostat, Sch Publ Hlth, Ann Arbor, MI USA
[7] Univ Florida, Dept Aging & Geriatr Res, Coll Med, Gainesville, FL USA
[8] Univ Calif San Diego, Dept Pediat, La Jolla, CA USA
[9] Univ Calif San Diego, Ctr Microbiome Innovat, La Jolla, CA USA
[10] Univ Calif San Diego, Dept Comp Sci & Engn, La Jolla, CA USA
[11] Univ Calif San Diego, Dept Bioengn, La Jolla, CA USA
[12] Calif Pacific Med Ctr Res Inst, Dept Res, San Francisco, CA USA
[13] Univ Calif San Francisco, Dept Epidemiol & Biostat, San Francisco, CA USA
[14] Stanford Univ, Geriatr Sect, Sch Med, Palo Alto, CA 94304 USA
[15] Vet Hlth Adm, Geriatr Res Educ & Clin Ctr, Palo Alto, CA USA
来源
JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES | 2023年 / 78卷 / 10期
基金
美国国家卫生研究院;
关键词
Biomarkers; Epidemiology; Metabolism; Sleep; CIRCADIAN-RHYTHMS; BACTERIA; QUALITY; ADULTS;
D O I
10.1093/gerona/glad011
中图分类号
R592 [老年病学]; C [社会科学总论];
学科分类号
03 ; 0303 ; 100203 ;
摘要
Background Growing evidence suggests bidirectional links between gut microbiota and sleep quality as shared contributors to health. Little is known about the relationship between microbiota and sleep among older persons. Methods We used 16S rRNA sequencing to characterize stool microbiota among men (n = 606, mean [standard deviation] age = 83.9 [3.8]) enrolled in the Osteoporotic Fractures in Men (MrOS) study from 2014 to 2016. Sleep was assessed concurrently by a questionnaire (Pittsburgh Sleep Quality index [PSQI]), and activity monitor to examine timing (acrophase) and regularity of patterns (F-statistic). Alpha diversity was measured using Faith's phylogenetic diversity (PD). Beta diversity was calculated with robust Aitchison distance with matrix completion (RPCA) and phylogenetic-RPCA (PRPCA). Their association with sleep variables was tested with partial distance-based redundancy analysis (dbRDA). Predictive-ratio biomarkers associated with sleep measurements were identified with CoDaCoRe. Results In unadjusted analyses, men with poor sleep (PSQI >5) tended to have lower alpha diversity compared to men with normal sleep (Faith's PD, beta = -0.15; 95% confidence interval [CI]: -0.30 to 0.01, p = .06). Sleep regularity was significantly associated with RPCA and PRPCA, even after adjusting for site, batch, age, ethnicity, body mass index, diabetes, antidepressant and sleep medication use, and health behaviors (RPCA/PRPCA dbRDA; p = .033/.002). In taxonomic analysis, ratios of 7:6 bacteria for better regularity (p = .0004) and 4:7 for worse self-reported sleep (p = .005) were differentially abundant: some butyrate-producing bacteria were associated with better sleep characteristics. Conclusions Subjective and objective indicators of sleep quality suggest that older men with better sleep patterns are more likely to harbor butyrate-producing bacteria associated with better health.
引用
收藏
页码:1925 / 1932
页数:8
相关论文
共 50 条
[1]  
Abrahamson M, 2017, CONT CLIN TRIAL COMM, V7, P158, DOI 10.1016/j.conctc.2017.07.002
[2]   Habitual Sleep Duration and the Colonic Mucosa-Associated Gut Microbiota in Humans-A Pilot Study [J].
Agrawal, Ritwick ;
Ajami, Nadim J. ;
Malhotra, Sonal ;
Chen, Liang ;
White, Donna L. ;
Sharafkhaneh, Amir ;
Hoffman, Kristi L. ;
Graham, David Y. ;
El-Serag, Hashem B. ;
Petrosino, Joseph F. ;
Li Jiao .
CLOCKS & SLEEP, 2021, 3 (03) :387-397
[3]   Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns [J].
Amir, Amnon ;
McDonald, Daniel ;
Navas-Molina, Jose A. ;
Kopylova, Evguenia ;
Morton, James T. ;
Xu, Zhenjiang Zech ;
Kightley, Eric P. ;
Thompson, Luke R. ;
Hyde, Embriette R. ;
Gonzalez, Antonio ;
Knight, Rob .
MSYSTEMS, 2017, 2 (02)
[4]   A preliminary examination of gut microbiota, sleep, and cognitive flexibility in healthy older adults [J].
Anderson, Jason R. ;
Carroll, Ian ;
Azcarate-Peril, M. Andrea ;
Rochette, Amber D. ;
Heinberg, Leslie J. ;
Peat, Christine ;
Steffen, Kristine ;
Manderino, Lisa M. ;
Mitchell, James ;
Gunstad, John .
SLEEP MEDICINE, 2017, 38 :104-107
[5]  
[Anonymous], 2020, R LANG ENV STAT COMP
[6]   Improved normalization of species count data in ecology by scaling with ranked subsampling (SRS): application to microbial communities [J].
Beule, Lukas ;
Karlovsky, Petr .
PEERJ, 2020, 8
[7]   Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2′s q2-feature-classifier plugin [J].
Bokulich, Nicholas A. ;
Kaehler, Benjamin D. ;
Rideout, Jai Ram ;
Dillon, Matthew ;
Bolyen, Evan ;
Knight, Rob ;
Huttley, Gavin A. ;
Caporaso, J. Gregory .
MICROBIOME, 2018, 6
[8]   Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 [J].
Bolyen, Evan ;
Rideout, Jai Ram ;
Dillon, Matthew R. ;
Bokulich, NicholasA. ;
Abnet, Christian C. ;
Al-Ghalith, Gabriel A. ;
Alexander, Harriet ;
Alm, Eric J. ;
Arumugam, Manimozhiyan ;
Asnicar, Francesco ;
Bai, Yang ;
Bisanz, Jordan E. ;
Bittinger, Kyle ;
Brejnrod, Asker ;
Brislawn, Colin J. ;
Brown, C. Titus ;
Callahan, Benjamin J. ;
Caraballo-Rodriguez, Andres Mauricio ;
Chase, John ;
Cope, Emily K. ;
Da Silva, Ricardo ;
Diener, Christian ;
Dorrestein, Pieter C. ;
Douglas, Gavin M. ;
Durall, Daniel M. ;
Duvallet, Claire ;
Edwardson, Christian F. ;
Ernst, Madeleine ;
Estaki, Mehrbod ;
Fouquier, Jennifer ;
Gauglitz, Julia M. ;
Gibbons, Sean M. ;
Gibson, Deanna L. ;
Gonzalez, Antonio ;
Gorlick, Kestrel ;
Guo, Jiarong ;
Hillmann, Benjamin ;
Holmes, Susan ;
Holste, Hannes ;
Huttenhower, Curtis ;
Huttley, Gavin A. ;
Janssen, Stefan ;
Jarmusch, Alan K. ;
Jiang, Lingjing ;
Kaehler, Benjamin D. ;
Bin Kang, Kyo ;
Keefe, Christopher R. ;
Keim, Paul ;
Kelley, Scott T. ;
Knights, Dan .
NATURE BIOTECHNOLOGY, 2019, 37 (08) :852-857
[9]   Facile Electrodeposition Method for Constructing Li2S as Artificial Solid Electrolyte Interphase for High-Performance Li Metal Anode [J].
Choi, Jong Chan ;
Hyun, Da-Eun ;
Choi, Jae Hun ;
Ra, Yejin ;
Kim, Yoon Ho ;
Sim, Jae Sol ;
Lee, Jung-Kul ;
Kang, Yun Chan .
SMALL, 2025, 21 (01)
[10]   Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms [J].
Caporaso, J. Gregory ;
Lauber, Christian L. ;
Walters, William A. ;
Berg-Lyons, Donna ;
Huntley, James ;
Fierer, Noah ;
Owens, Sarah M. ;
Betley, Jason ;
Fraser, Louise ;
Bauer, Markus ;
Gormley, Niall ;
Gilbert, Jack A. ;
Smith, Geoff ;
Knight, Rob .
ISME JOURNAL, 2012, 6 (08) :1621-1624