Activation of Embryonic Gene Transcription in Neural Precursor Cells Derived from the Induced Pluripotent Stem Cells of the Patients with Parkinson's Disease

被引:0
作者
Fedoseyeva, Viya B. [1 ]
Novosadova, Ekaterina V. [1 ]
Nenasheva, Valentina V. [1 ]
Novosadova, Lyudmila V. [1 ]
Grivennikov, Igor A. [1 ]
Tarantul, Vyacheslav Z. [1 ]
机构
[1] Natl Res Ctr Kurchatov Inst, Moscow 123182, Russia
基金
俄罗斯科学基金会;
关键词
Parkinson's disease; induced pluripotent stem cells; neural precursors; RNA-seq; differential gene expression; PCR; bioinformatic analysis; RETINOIC ACID; SYSTEM-DEVELOPMENT; EXPRESSION; MIDBRAIN; DIFFERENTIATION; HINDBRAIN; MIGRATION; NEURONS; BINDING; ASCL1;
D O I
10.1134/S0006297923040077
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Parkinson's disease (PD) is one of the most common neurodegenerative diseases in the world. Despite numerous studies, the causes of this pathology remain completely unknown. This is, among other things, due to the difficulty of obtaining biological material for analysis. Neural cell cultures derived from the induced pluripotent stem cells (IPSCs) provide a great potential for studying molecular events underlying the pathogenesis of PD. This paper presents the results of bioinformatic analysis of the data obtained using RNA-seq technology in the study of neural precursors (NP) derived from IPSCs of the healthy donors and patients with PD carrying various mutations that are commonly associated with familial PD. This analysis showed that the level of transcription of multiple genes actively expressed in the nervous system at the embryonic stage of development was significantly increased in the NP cells obtained from the patients with PD, unlike in the case of healthy donors. Bioinformatic data have been, in general, confirmed using real-time PCR. The obtained data suggest that one of the causes of PD may be the shift of the gene expression pattern in neuronal cells towards embryonic gene expression pattern (termed dematuration).
引用
收藏
页码:515 / 525
页数:11
相关论文
共 69 条
[61]   Tfap2a and Foxd3 regulate early steps in the development of the neural crest progenitor population [J].
Wang, Wen-Der ;
Melville, David B. ;
Montero-Balaguer, Mercedes ;
Hatzopoulos, Antonis K. ;
Knapik, Ela W. .
DEVELOPMENTAL BIOLOGY, 2011, 360 (01) :173-185
[62]   An Integrated Network Analysis of mRNA and Gene Expression Profiles in Parkinson's Disease [J].
Wang, Yaping ;
Wang, Zhiyun .
MEDICAL SCIENCE MONITOR, 2020, 26
[63]  
Wassarman KM, 1997, DEVELOPMENT, V124, P2923
[64]   Induced pluripotent stem cell-based modeling of mutant LRRK2-associated Parkinson's disease [J].
Weykopf, Beatrice ;
Haupt, Simone ;
Jungverdorben, Johannes ;
Flitsch, Lea Jessica ;
Hebisch, Matthias ;
Liu, Guang-Hui ;
Suzuki, Keiichiro ;
Belmonte, Juan Carlos Izpisua ;
Peitz, Michael ;
Blaess, Sandra ;
Till, Andreas ;
Bruestle, Oliver .
EUROPEAN JOURNAL OF NEUROSCIENCE, 2019, 49 (04) :561-589
[65]   PAX3 Promotes Cell Migration and CXCR4 Gene Expression in Neural Crest Cells [J].
Xu, Man ;
Li, Yongle ;
Du, Jinfeng ;
Lin, Hengrong ;
Cao, Sixian ;
Mao, Zuming ;
Wu, Ronghua ;
Liu, Mei ;
Liu, Yan ;
Yin, Qiyou .
JOURNAL OF MOLECULAR NEUROSCIENCE, 2018, 64 (01) :1-8
[66]   Retinoic acid influences the development of the inferior olivary nucleus in the rodent [J].
Yamamoto, M ;
Fujinuma, M ;
Hirano, S ;
Hayakawa, Y ;
Clagett-Dame, M ;
Zhang, JH ;
McCaffery, P .
DEVELOPMENTAL BIOLOGY, 2005, 280 (02) :421-433
[67]   A critical period for retinoic acid teratogenesis and loss of neurophilic migration of pontine nuclei neurons [J].
Yamamoto, M ;
Zhang, J ;
Smith, D ;
Hayakawa, Y ;
McCaffery, P .
MECHANISMS OF DEVELOPMENT, 2003, 120 (06) :701-709
[68]   Dynamic temporal requirement of Wnt1 in midbrain dopamine neuron development [J].
Yang, Jasmine ;
Brown, Ashly ;
Ellisor, Debra ;
Paul, Erin ;
Hagan, Nellwyn ;
Zervas, Mark .
DEVELOPMENT, 2013, 140 (06) :1342-1352
[69]   Midbrain organoids mimic early embryonic neurodevelopment and recapitulate LRRK2-p.Gly2019Ser-associated gene expression [J].
Zagare, Alise ;
Barmpa, Kyriaki ;
Smajic, Semra ;
Smits, Lisa M. ;
Grzyb, Kamil ;
Grunewald, Anne ;
Skupin, Alexander ;
Nickels, Sarah L. ;
Schwamborn, Jens C. .
AMERICAN JOURNAL OF HUMAN GENETICS, 2022, 109 (02) :311-327