Peripheral blood biomarkers predict viral rebound following antiretroviral therapy discontinuation in SIV-infected, early ART-treated rhesus macaques

被引:3
作者
Aid, Malika [1 ]
Colarusso, Alessandro [1 ]
Walker-Sperling, Victoria [1 ]
Barouch, Dan H. [1 ,2 ,3 ]
机构
[1] Harvard Med Sch, Ctr Virol & Vaccine Res, Beth Israel Deaconess Med Ctr, Boston, MA 02215 USA
[2] MIT, Massachusetts Gen Hosp, Ragon Inst, Cambridge, MA 02139 USA
[3] Harvard Univ, Cambridge, MA 02138 USA
基金
美国国家卫生研究院;
关键词
RESERVOIR;
D O I
10.1016/j.xcrm.2023.101122
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The discovery of biomarkers that predict viral rebound after discontinuation of antiretroviral therapy (ART) would significantly contribute to the HIV cure field. We previously initiated ART in 20 rhesus macaques on days 0, 1, 2, and 3 following SIVmac251 infection. After 6 months, we discontinued ART and observed viral rebound in 9 of 20 animals, which provided an opportunity to define peripheral biomarkers on ART that pre-dicted viral rebound following ART discontinuation. We show that interleukin-1 (IL-1), IL-6_JAK_STAT3, IL-10, transforming growth factor (3 (TGF-(3), IL-22, and IL-23 signaling and activation of monocyte, macro-phage, and antigen processing and presentation pathways during ART suppression correlated with viral rebound. These signatures were validated in a second cohort of macaques. Our data suggest that low levels of antigen and proinflammatory signaling during ART suppression correlate with the presence of a rebound -competent viral reservoir. Interventions that modulate these peripheral biomarkers may be promising candi-dates to evaluate as potential HIV-1 cure strategies.
引用
收藏
页数:15
相关论文
共 24 条
[1]   eNetXplorer: an R package for the quantitative exploration of elastic net families for generalized linear models [J].
Candia, Julian ;
Tsang, John S. .
BMC BIOINFORMATICS, 2019, 20 (1)
[2]   Classification of microarrays to nearest centroids [J].
Dabney, AR .
BIOINFORMATICS, 2005, 21 (22) :4148-4154
[3]   The Quest for Cellular Markers of HIV Reservoirs: Any Color You Like [J].
Darcis, Gilles ;
Berkhout, Ben ;
Pasternak, Alexander O. .
FRONTIERS IN IMMUNOLOGY, 2019, 10
[4]   The multifaceted nature of HIV latency [J].
Dufour, Caroline ;
Gantner, Pierre ;
Fromentin, Remi ;
Chomont, Nicolas .
JOURNAL OF CLINICAL INVESTIGATION, 2020, 130 (07) :3381-3390
[5]   Parallel analysis of transcription, integration, and sequence of single HIV-1 proviruses [J].
Einkauf, Kevin B. ;
Osborn, Matthew R. ;
Gao, Ce ;
Sun, Weiwei ;
Sun, Xiaoming ;
Lian, Xiaodong ;
Parsons, Elizabeth M. ;
Gladkov, Gregory T. ;
Seiger, Kyra W. ;
Blackmer, Jane E. ;
Jiang, Chenyang ;
Yukl, Steven A. ;
Rosenberg, Eric S. ;
Yu, Xu G. ;
Lichterfeld, Mathias .
CELL, 2022, 185 (02) :266-+
[6]   Non-invasive plasma glycomic and metabolic biomarkers of post-treatment control of HIV [J].
Giron, Leila B. ;
Palmer, Clovis S. ;
Liu, Qin ;
Yin, Xiangfan ;
Papasavvas, Emmanouil ;
Sharaf, Radwa ;
Etemad, Behzad ;
Damra, Mohammad ;
Goldman, Aaron R. ;
Tang, Hsin-Yao ;
Johnston, Rowena ;
Mounzer, Karam ;
Kostman, Jay R. ;
Tebas, Pablo ;
Landay, Alan ;
Montaner, Luis J. ;
Jacobson, Jeffrey M. ;
Li, Jonathan Z. ;
Abdel-Mohsen, Mohamed .
NATURE COMMUNICATIONS, 2021, 12 (01)
[7]   Sample-level enrichment analysis unravels shared stress phenotypes among multiple cancer types [J].
Gundem, Gunes ;
Lopez-Bigas, Nuria .
GENOME MEDICINE, 2012, 4
[8]   Immunological biomarkers predict HIV-1 viral rebound after treatment interruption [J].
Hurst, Jacob ;
Hoffmann, Matthias ;
Pace, Matthew ;
Williams, James P. ;
Thornhill, John ;
Hamlyn, Elizabeth ;
Meyerowitz, Jodi ;
Willberg, Chris ;
Koelsch, Kersten K. ;
Robinson, Nicola ;
Brown, Helen ;
Fisher, Martin ;
Kinloch, Sabine ;
Cooper, David A. ;
Schechter, Mauro ;
Tambussi, Giuseppe ;
Fidler, Sarah ;
Babiker, Abdel ;
Weber, Jonathan ;
Kelleher, Anthony D. ;
Phillips, Rodney E. ;
Frater, John .
NATURE COMMUNICATIONS, 2015, 6
[9]   Immune activation and HIV persistence: implications for curative approaches to HIV infection [J].
Klatt, Nichole R. ;
Chomont, Nicolas ;
Douek, Daniel C. ;
Deeks, Steven G. .
IMMUNOLOGICAL REVIEWS, 2013, 254 :326-342
[10]  
Li JZ, 2016, AIDS, V30, P343, DOI [10.1097/01.aids.0000499516.66930.89, 10.1097/QAD.0000000000000953]