Linear discriminant analysis of grain quality traits in rice (Oryza sativa L.) using the digital imaging technique

被引:4
|
作者
Deepika, C. [1 ,2 ,6 ]
Gnanamalar, R. P. [2 ,3 ]
Thangaraj, K. [2 ]
Revathy, N. [4 ]
Karthikeyan, A. [5 ]
机构
[1] Tamil Nadu Agr Univ, Ctr Plant Breeding & Genet, Dept Plant Breeding & Genet, Coimbatore, Tamil Nadu, India
[2] Agr Coll & Res Inst, Dept Plant Breeding & Genet, Madurai, Tamil Nadu, India
[3] Tamil Nadu Agr Univ, Ctr Plant Breeding & Genet, Dept Pulses, Coimbatore, Tamil Nadu, India
[4] Agr Coll & Res Inst, Dept Plant Pathol, Kudumiyanmalai, Tamil Nadu, India
[5] Jeju Natl Univ, Subtrop Hort Res Inst, Jeju, South Korea
[6] Tamil Nadu Agr Univ, Ctr Plant Breeding & Genet, Dept Plant Breeding & Genet, Coimbatore 641033, Tamil Nadu, India
关键词
Aroma rice; Digital imaging; Grain quality traits; Linear discriminant analysis; Phenomics; PERFORMANCE; CULTIVARS; HYBRID;
D O I
10.1016/j.jcs.2022.103609
中图分类号
TS2 [食品工业];
学科分类号
0832 ;
摘要
Rice (Oryza sativa L.) is the most important food crop in India, and aromatic rice (Basmati and non-basmati) occupies an important place due to its demand in the domestic and international markets. Despite its economic value, it is cultivated mainly in North-western India, whereas cultivation is limited in other rice-growing regions of India, particularly southern Indian states. Aromatic rice is determined based on aroma content, grain quality traits, and the conventional methods for measuring grain quality traits are time-consuming and laborious. In this study, 21 hybrids were obtained from 10 rice cultivars (Aromatic and non-aromatic), using a line x tester fashion mating design. Further, the grain quality traits were evaluated [i.e., grain size and grain type] with the support of digital imaging technique (DIT) and then assessed the gelatinization temperature, and aroma. The mean values of all the traits from 10 parents and their 21 hybrids were subjected to linear discriminant analysis (LDA). The precise classification of grain size into short, medium, and long-grained groups with higher accuracy levels was observed rather than by grain type, gelatinization temperature, and aroma. The percentage of separation by LD1 was 98.91%, and LD2 was 1.09%. In addition, we evaluated the agronomic traits of the hybrids, revealing the agronomically superior aromatic hybrids (i.e., CO 51 x Jeeragasamba and MDU 6 x Jeeragasamba). Taken together, the present study shows the efficiency of DIT in obtaining accurate classifications of rice genotypes. The newly developed lines could serve as potential resources to further develop aroma-type rice genotypes and could provide genetic stock for use in breeding programs.
引用
收藏
页数:12
相关论文
共 50 条
  • [1] Association mapping for yield and grain quality traits in rice (Oryza sativa L.)
    de Oliveira Borba, Tereza Cristina
    Vianello Brondani, Rosana Pereira
    Breseghello, Flavio
    Guedes Coelho, Alexandre Siqueira
    Mendonca, Joao Antonio
    Nakano Rangel, Paulo Hideo
    Brondani, Claudio
    GENETICS AND MOLECULAR BIOLOGY, 2010, 33 (03) : 515 - U142
  • [2] Heterosis and segregation distortion for grain quality traits using diverse genotypes in rice (Oryza sativa L.)
    Verma, OP
    Srivastava, HK
    JOURNAL OF SUSTAINABLE AGRICULTURE, 2005, 26 (03): : 15 - 30
  • [3] QTL detection of rice grain quality traits by microsatellite markers using an indica rice (Oryza sativa L.) combination
    Sabouri, Hossein
    JOURNAL OF GENETICS, 2009, 88 (01) : 81 - 85
  • [4] Combining ability for yield components and key quality traits in scented rice (Oryza sativa L.)
    Panwar, L. L.
    Ranwah, B. R.
    RESEARCH ON CROPS, 2008, 9 (02) : 380 - 385
  • [5] Genotype plus Genotype by Environment Interaction (GGE) Biplot Analysis of Nutrient Quality Traits in Rice (Oryza sativa L.)
    Sharifi, Peyman
    PHILIPPINE JOURNAL OF CROP SCIENCE, 2013, 38 (02): : 9 - 20
  • [6] Validation of hybrid rice seed vigour traits using SSR marker (Oryza sativa L. )
    Kumari, Shruti
    Chakrabarty, S. K.
    Bhowmick, P. K.
    Singh, Vikram Jeet
    Prasad, A. S. Hari
    INDIAN JOURNAL OF GENETICS AND PLANT BREEDING, 2020, 80 (02) : 204 - 208
  • [7] Governance of gene action and combining ability for certain grain quality traits in three diverse rice (Oryza sativa L.) growing ecosystems
    Verma, OP
    Santoshi, US
    Srivastava, HK
    JOURNAL OF SUSTAINABLE AGRICULTURE, 2003, 22 (04): : 63 - 78
  • [8] Variability and heterosis of seed vigour traits in hybrid rice (Oryza sativa L.)
    Kumari, Shruti
    Chakrabarty, S. K.
    Paul, Debashis
    Singh, Y.
    Bhowmick, P. K.
    Prasad, A. S. Hari
    INDIAN JOURNAL OF GENETICS AND PLANT BREEDING, 2023, 83 (02) : 168 - 175
  • [9] Metabolic prediction of important agronomic traits in hybrid rice (Oryza sativa L.)
    Dan, Zhiwu
    Hu, Jun
    Zhou, Wei
    Yao, Guoxin
    Zhu, Renshan
    Zhu, Yingguo
    Huang, Wenchao
    SCIENTIFIC REPORTS, 2016, 6
  • [10] Zinc Nutrition Responses to Agronomic and Yield Traits, Kernel Quality, and Pollen Viability in Rice (Oryza sativa L.)
    Kandil, Essam E.
    El-Banna, Aly A. A.
    Tabl, Dalia M. M.
    Mackled, Marwa I.
    Ghareeb, Rehab Y.
    Al-Huqail, Asma A.
    Ali, Hayssam M.
    Jebril, Jebril
    Abdelsalam, Nader R.
    FRONTIERS IN PLANT SCIENCE, 2022, 13