Comprehensive genomic characterisation of the NAC transcription factor family and its response to drought stress in Eucommia ulmoides

被引:3
|
作者
Wang, Qi [1 ]
Hu, Fengcheng [2 ]
Yao, Zhaoqun [3 ]
Zhao, Xinfeng [2 ]
Chu, Guangming [1 ]
Ye, Jing [1 ]
机构
[1] Shihezi Univ, Agr Coll, Lab Forestry Dept, Shihezi, Peoples R China
[2] Forestry Bur Lveyang Cty, Lveyang Cty Forest Tree Seedling Workstat, Lveyang, Peoples R China
[3] Shihezi Univ, Agr Coll, Lab Plant Protect Dept, Shihezi, Peoples R China
来源
PEERJ | 2023年 / 11卷
关键词
Eucommia ulmoides; NAC family; Drought-responsive; Gene expression; Phylogenetic analysis; TURNIP-CRINKLE-VIRUS; NATURAL-RUBBER; ARABIDOPSIS; EVOLUTION; IDENTIFICATION; TOLERANCE; INSIGHTS; GENES;
D O I
10.7717/peerj.16298
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The NAC transcription factor family enhances plant adaptation to environmental challenges by participating in signalling pathways triggered by abiotic stressors and hormonal cues. We identified 69 NAC genes in the Eucommia ulmoides genome and renamed them according to their chromosomal distribution. These EuNAC proteins were clustered into 13 sub-families and distributed on 16 chromosomes and 2 scaffolds. The gene structures suggested that the number of exons varied from two to eight among these EuNACs, with a multitude of them containing three exons. Duplicated events resulted in a large gene family; 12 and four pairs of EuNACs were the result of segmental and tandem duplicates, respectively. The drought-stress response pattern of 12 putative EuNACs was observed under drought treatment, revealing that these EuNACs could play crucial roles in mitigating the effects of drought stress responses and serve as promising candidate genes for genetic engineering aimed at enhancing the drought stress tolerance of E. ulmoides. This study provides insight into the evolution, diversity, and characterisation of NAC genes in E. ulmoides and will be helpful for future characterisation of putative EuNACs associated with water deficit.
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页数:19
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