A moderately thermophilic origin of a novel family of marine group II euryarchaeota from deep ocean

被引:2
|
作者
Liu, Haodong [1 ,2 ,3 ,4 ]
Liu, Wei-Wei [5 ,6 ]
Haro-Moreno, Jose M. [7 ]
Xu, Bu [1 ,2 ]
Zheng, Yanfen [8 ,9 ]
Liu, Jiwen [8 ]
Tian, Jiwei [10 ]
Zhang, Xiao-Hua [8 ]
Zhou, Ning-Yi [5 ,6 ]
Qin, Liping [3 ]
Zhu, Yuanqing [1 ,11 ]
Rodriguez-Valera, Francisco [7 ,12 ]
Zhang, Chuanlun [1 ,2 ,11 ]
机构
[1] Southern Univ Sci & Technol, Dept Ocean Sci & Engn, Shenzhen Key Lab Marine Archaea Geoom, Shenzhen 518055, Peoples R China
[2] Southern Marine Sci & Engn Guangdong Lab Guangzho, Guangzhou 510000, Peoples R China
[3] Univ Sci & Technol China, CAS Key Lab Crust Mantle Mat & Environm, Hefei 230026, Peoples R China
[4] Shanghai Jiao Tong Univ, Sch Med, Chinese Ctr Trop Dis Res, Sch Global Hlth, Shanghai 200025, Peoples R China
[5] Shanghai Jiao Tong Univ, State Key Lab Microbial Metab, Shanghai 200240, Peoples R China
[6] Shanghai Jiao Tong Univ, Sch Life Sci & Biotechnol, Shanghai 200240, Peoples R China
[7] Univ Miguel Hernandez, Dept Prod Vegetal & Microbiol, Evolutionary Genom Grp, Alicante 03550, Spain
[8] Ocean Univ China, Coll Marine Life Sci, Qingdao 266003, Peoples R China
[9] Chinese Acad Agr Sci, Tobacco Res Inst, Marine Agr Res Ctr, Qingdao 266101, Peoples R China
[10] Ocean Univ China, Key Lab Phys Oceanog, Qingdao 266100, Peoples R China
[11] Shanghai Earthquake Agcy, Shanghai Sheshan Natl Geophys Observ, Shanghai 200062, Peoples R China
[12] Moscow Inst Phys & Technol, Lab Theoret & Comp Studies Biol Macromol & Genome, Dolgoprudnyi, Russia
基金
俄罗斯科学基金会; 中国国家自然科学基金;
关键词
COMPLETE GENOME SEQUENCE; AMMONIA-OXIDIZING ARCHAEON; SP-NOV REPRESENTS; HYPERTHERMOPHILIC ARCHAEON; SP; NOV; HYDROTHERMAL VENT; PARALVINELLA SP; BACTERIA; GENE; SEA;
D O I
10.1016/j.isci.2023.107664
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Marine group II (MGII) is the most abundant planktonic heterotrophic archaea in the ocean. The evolutionary history of MGII archaea is elusive. In this study, 13 new MGII metagenome-assembled genomes were recovered from surface to the hadal zone in Challenger Deep of the Mariana Trench; four of them from the deep ocean represent a novel group. The optimal growth temperature (OGT) of the common ancestor of MGII has been estimated to be at about 60 degrees C and OGTs of MGIIc, MGIIb, and MGIIa at 47 degrees C-50 degrees C, 37 degrees C-44 degrees C, and 30 degrees C-37 degrees C, respectively, suggesting the adaptation of these species to different temperatures during evolution. The estimated OGT range of MGIIc was supported by experimental measurements of cloned beta-galactosidase that showed optimal enzyme activity around 50 degrees C. These results indicate that MGIIc may have originated from a common ancestor that lived in warm or even hot marine environment, such as hydrothermal vents.
引用
收藏
页数:16
相关论文
共 50 条
  • [1] A new class of marine Euryarchaeota group II from the mediterranean deep chlorophyll maximum
    Martin-Cuadrado, Ana-Belen
    Garcia-Heredia, Inmaculada
    Molto, Aitor Gonzaga
    Lopez-Ubeda, Rebeca
    Kimes, Nikole
    Lopez-Garcia, Purificacion
    Moreira, David
    Rodriguez-Valera, Francisco
    ISME JOURNAL, 2015, 9 (07) : 1619 - 1634
  • [2] Transcriptional activity differentiates families of Marine Group II Euryarchaeota in the coastal ocean
    Damashek, Julian
    Okotie-Oyekan, Aimee Oyinlade
    Gifford, Scott Michael
    Vorobev, Alexey
    Moran, Mary Ann
    Hollibaugh, James Timothy
    ISME COMMUNICATIONS, 2021, 1 (01):
  • [3] Are Marine Group II Euryarchaeota significant contributors to tetraether lipids in the ocean?
    Schouten, Stefan
    Villanueva, Laura
    Hopmans, Ellen C.
    van der Meer, Marcel T. J.
    Damste, Jaap S. Sinninghe
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (41) : E4285 - E4285
  • [4] Novel Abundant Oceanic Viruses of Uncultured Marine Group II Euryarchaeota
    Philosof, Alon
    Yutin, Natalya
    Flores-Uribe, Jose
    Sharon, Itai
    Koonin, Eugene V.
    Beja, Oded
    CURRENT BIOLOGY, 2017, 27 (09) : 1362 - 1368
  • [5] Niche differentiation among annually recurrent coastal Marine Group II Euryarchaeota
    Orellana, Luis H.
    Ben Francis, T.
    Krueger, Karen
    Teeling, Hanno
    Mueller, Marie-Caroline
    Fuchs, Bernhard M.
    Konstantinidis, Konstantinos T.
    Amann, Rudolf I.
    ISME JOURNAL, 2019, 13 (12) : 3024 - 3036
  • [6] Marine Group II Euryarchaeota Contribute to the Archaeal Lipid Pool in Northwestern Pacific Ocean Surface Waters
    Ma, Cenling
    Coffinet, Sarah
    Lipp, Julius S.
    Hinrichs, Kai-Uwe
    Zhang, Chuanlun
    FRONTIERS IN MICROBIOLOGY, 2020, 11
  • [7] New insights into marine group III Euryarchaeota, from dark to light
    Haro-Moreno, Jose M.
    Rodriguez-Valera, Francisco
    Lopez-Garcia, Purificacion
    Moreira, David
    Martin-Cuadrado, Ana-Belen
    ISME JOURNAL, 2017, 11 (05) : 1102 - 1117
  • [8] Methylomarinovum tepidoasis sp. nov., a moderately thermophilic methanotroph of the family Methylothermaceae isolated from a deep-sea hydrothermal field
    Hirayama, Hisako
    Takaki, Yoshihiro
    Abe, Mariko
    Miyazaki, Masayuki
    Uematsu, Katsuyuki
    Matsui, Yohei
    Takai, Ken
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2024, 74 (03)
  • [9] Marine Group II Archaea, potentially important players in the global ocean carbon cycle
    Zhang, Chuanlun L.
    Xie, Wei
    Martin-Cuadrado, Ana-Belen
    Rodriguez-Valera, Francisco
    FRONTIERS IN MICROBIOLOGY, 2015, 6
  • [10] A Novel Moderately Thermophilic Type Ib Methanotroph Isolated from an Alkaline Thermal Spring in the Ethiopian Rift Valley
    Islam, Tajul
    Gessesse, Amare
    Garcia-Moyano, Antonio
    Murrell, J. Colin
    Ovreas, Lise
    MICROORGANISMS, 2020, 8 (02)