Discovery of Natural Multitarget Xanthine Oxidase Inhibitors for Therapeutic Hyperuricemia Using Virtual Screening, Network Pharmacology and in vitro Experimental Verification

被引:4
作者
Cao, Luxi [1 ]
Ma, Bei [1 ]
Yi, Bingxiang [1 ]
Liu, Yaru [1 ]
Sun, Jiaying [1 ]
机构
[1] Chongqing Univ Technol Chongqing, Sch Pharm & Bioengn, Chongqing 400054, Peoples R China
关键词
Coumarin; Hyperuricemia; Xanthine oxidase inhibitor; Virtual screening; Network pharmacology; TRADITIONAL CHINESE MEDICINE; BIOLOGICAL EVALUATION; DRUG DISCOVERY; DERIVATIVES; DATABASE; DESIGN; MECHANISM; SOFTWARE; DOCKING;
D O I
10.1002/slct.202301939
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
In this research, based on an important target xanthine dehydrogenase/oxidase (XDH/XO) of therapeutical hyperuricemia, natural multitarget XO inhibitors are discovered from Chinese herbal medicine. As a result, 31 natural active compounds are found using network pharmacology, molecular docking and dynamic simulation computational approaches. Further experimental verification shows that hesperetin, notopterol and cnidimol B are the promising lead compounds as multitarget XO inhibitors. Moreover, hesperetin, as an obvious competitive inhibitor, has the best bioactivities (IC50=13.63 & PLUSMN;0.12 & mu;M). Additionally, inhibitory mechanism illustrates that these compounds treat hyperuricemia through targets HPRT1, NT5E, XDH, HSP90AA1, STAT3, ESRI, PPARG, MAPK1, MAPK3 SIRT1, mTOR and TLR4. Relevant signaling pathways involve in SCF-Kit signaling pathway, interleukin signaling pathway, immune system, PDGFR signaling pathway in disease, and cellular response to heat stress. Therefore, the current research provides a new idea for discovery and development of novel XOIs, and has innovative significance for the expansion of related drug research.
引用
收藏
页数:8
相关论文
共 53 条
[1]  
Amberger Joanna S, 2017, Curr Protoc Bioinformatics, V58, DOI 10.1002/cpbi.27
[2]   Lead optimization of isocytosine-derived xanthine oxidase inhibitors [J].
Bajaj, Komal ;
Burudkar, Sandeep ;
Shah, Pranay ;
Keche, Ashish ;
Ghosh, Usha ;
Tannu, Prashant ;
Khanna, Smriti ;
Srivastava, Ankita ;
Deshmukh, Nitin J. ;
Dixit, Amol ;
Ahire, Yogesh ;
Damre, Anagha ;
Nemmani, Kumar V. S. ;
Kulkarni-Almeida, Asha ;
B-Rao, Chandrika ;
Sharma, Rajiv ;
Sivaramakrishnan, H. .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2013, 23 (03) :834-838
[3]  
Bowers K.J., 2006, Proceedings of the 2006 ACM/IEEE Conference on Supercomputing (SC06), Tampa
[4]   Database of traditional Chinese medicine and its application to studies of mechanism and to prescription validation [J].
Chen, X. ;
Zhou, H. ;
Liu, Y. B. ;
Wang, J. F. ;
Li, H. ;
Ung, C. Y. ;
Han, L. Y. ;
Cao, Z. W. ;
Chen, Y. Z. .
BRITISH JOURNAL OF PHARMACOLOGY, 2006, 149 (08) :1092-1103
[5]   Flavonoids and phenylethanoid glycosides from Lippia nodiflora as promising antihyperuricemic agents and elucidation of their mechanism of action [J].
Cheng, Lee-Chuen ;
Murugaiyah, Vikneswaran ;
Chan, Kit-Lam .
JOURNAL OF ETHNOPHARMACOLOGY, 2015, 176 :485-493
[6]   ADMET Profiling in Drug Discovery and Development: Perspectives of In Silico, In Vitro and Integrated Approaches [J].
Daoud, Nour El-Huda ;
Borah, Pobitra ;
Deb, Pran Kishore ;
Venugopala, Katharigatta N. ;
Hourani, Wafa ;
Alzweiri, Muhammed ;
Bardaweel, Sanaa K. ;
Tiwari, Vinod .
CURRENT DRUG METABOLISM, 2021, 22 (07) :503-522
[7]   Global epidemiology of gout: prevalence, incidence, treatment patterns and risk factors [J].
Dehlin, Mats ;
Jacobsson, Lennart ;
Roddy, Edward .
NATURE REVIEWS RHEUMATOLOGY, 2020, 16 (07) :380-390
[8]   AutoDock Vina 1.2.0: New Docking Methods, Expanded Force Field, and Python']Python Bindings [J].
Eberhardt, Jerome ;
Santos-Martins, Diogo ;
Tillack, Andreas F. ;
Forli, Stefano .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2021, 61 (08) :3891-3898
[9]   Reactome pathway analysis: a high-performance in-memory approach [J].
Fabregat, Antonio ;
Sidiropoulos, Konstantinos ;
Viteri, Guilherme ;
Forner, Oscar ;
Marin-Garcia, Pablo ;
Arnau, Vicente ;
D'Eustachio, Peter ;
Stein, Lincoln ;
Hermjakob, Henning .
BMC BIOINFORMATICS, 2017, 18
[10]   HERB: a high-throughput experiment- and reference-guided database of traditional Chinese medicine [J].
Fang, ShuangSang ;
Dong, Lei ;
Liu, Liu ;
Guo, JinCheng ;
Zhao, LianHe ;
Zhang, JiaYuan ;
Bu, DeChao ;
Liu, XinKui ;
Huo, PeiPei ;
Cao, WanChen ;
Dong, QiongYe ;
Wu, JiaRui ;
Zeng, Xiaoxi ;
Wu, Yang ;
Zhao, Yi .
NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) :D1197-D1206