The Functions of N6-Methyladenosine in Nuclear RNAs

被引:2
作者
Zhigalova, Nadezhda A. [1 ]
Oleynikova, Katerina Yu. [1 ]
Ruzov, Alexey S. [1 ]
Ermakov, Alexander S. [1 ,2 ]
机构
[1] Russian Acad Sci, Inst Bioengn, Res Ctr Biotechnol, Moscow 119071, Russia
[2] Lomonosov Moscow State Univ, Fac Biol, Moscow 119991, Russia
基金
俄罗斯科学基金会;
关键词
RNA modifications; N-6-methyladenosine (m(6)A); methyltransferases METTL3 and METTL14; demethylases FTO and ALKBH5; m(6)A-binding proteins of the YTHDF and YTHDC families; chromatin; R-loops; R-LOOP FORMATION; MESSENGER-RNA; GENE-EXPRESSION; METHYLATION; CHROMATIN; TRANSCRIPTION; N6-METHYLADENOSINE; PROTEINS; RESIDUES; REVEALS;
D O I
10.1134/S0006297924010103
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
N-6-methyladenosine (m(6)A) is one of the most common modifications in both eukaryotic and prokaryotic mRNAs. It has been experimentally confirmed that m(6)A methylation is involved in the regulation of stability and translation of various mRNAs. Until recently, the majority of m(6)A-related studies have been focused on the cytoplasmic functions of this modification. Here, we review new data on the role of m(6)A in several key biological processes taking place in the cell nucleus, such as transcription, chromatin organization, splicing, nuclear-cytoplasmic transport, and R-loop metabolism. Based on analysis of these data, we suggest that m(6)A methylation of nuclear RNAs is another level of gene expression regulation which, together with DNA methylation and histone modifications, controls chromatin structure and functioning in various biological contexts.
引用
收藏
页码:159 / 172
页数:14
相关论文
共 114 条
  • [1] N6-methyladenosine regulates the stability of RNA:DNA hybrids in human cells
    Abakir, Abdulkadir
    Giles, Tom C.
    Cristini, Agnese
    Foster, Jeremy M.
    Dai, Nan
    Starczak, Marta
    Rubio-Roldan, Alejandro
    Li, Miaomiao
    Eleftheriou, Maria
    Crutchley, James
    Flatt, Luke
    Young, Lorraine
    Gaffney, Daniel J.
    Denning, Chris
    Dalhus, Bjorn
    Emes, Richard D.
    Gackowski, Daniel
    Correa, Ivan R., Jr.
    Garcia-Perez, Jose L.
    Klungland, Arne
    Gromak, Natalia
    Ruzov, Alexey
    [J]. NATURE GENETICS, 2020, 52 (01) : 48 - +
  • [2] R Loops: From Transcription Byproducts to Threats to Genome Stability
    Aguilera, Andres
    Garcia-Muse, Tatiana
    [J]. MOLECULAR CELL, 2012, 46 (02) : 115 - 124
  • [3] HNRNPA2B1 Is a Mediator of m6A-Dependent Nuclear RNA Processing Events
    Alarcon, Claudio R.
    Goodarzi, Hani
    Lee, Hyeseung
    Liu, Xuhang
    Tavazoie, Saeed
    Tavazoie, Sohail F.
    [J]. CELL, 2015, 162 (06) : 1299 - 1308
  • [4] Dynamic m6A methylation facilitates mRNA triaging to stress granules
    Anders, Maximilian
    Chelysheva, Irina
    Goebel, Ingrid
    Trenkner, Timo
    Zhou, Jun
    Mao, Yuanhui
    Verzini, Silvia
    Qian, Shu-Bing
    Ignatova, Zoya
    [J]. LIFE SCIENCE ALLIANCE, 2018, 1 (04)
  • [5] MODOMICS: a database of RNA modification pathways. 2017 update
    Boccaletto, Pietro
    Machnicka, Magdalena A.
    Purta, Elzbieta
    Piatkowski, Pawe
    Baginski, Blazej
    Wirecki, Tomasz K.
    de Crecy-Lagard, Valerie
    Ross, Robert
    Limbach, Patrick A.
    Kotter, Annika
    Helm, Mark
    Bujnicki, Janusz M.
    [J]. NUCLEIC ACIDS RESEARCH, 2018, 46 (D1) : D303 - D307
  • [6] Biological roles of adenine methylation in RNA
    Boulias, Konstantinos
    Greer, Eric Lieberman
    [J]. NATURE REVIEWS GENETICS, 2023, 24 (03) : 143 - 160
  • [7] N-6-METHYLADENOSINE RESIDUES IN AN INTRON-SPECIFIC REGION OF PROLACTIN PRE-MESSENGER-RNA
    CARROLL, SM
    NARAYAN, P
    ROTTMAN, FM
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 1990, 10 (09) : 4456 - 4465
  • [8] Nascent Connections: R-Loops and Chromatin Patterning
    Chedin, Frederic
    [J]. TRENDS IN GENETICS, 2016, 32 (12) : 828 - 838
  • [9] R-ChIP Using Inactive RNase H Reveals Dynamic Coupling of R-loops with Transcriptional Pausing at Gene Promoters
    Chen, Liang
    Chen, Jia-Yu
    Zhang, Xuan
    Gu, Ying
    Xiao, Rui
    Shao, Changwei
    Tang, Peng
    Qian, Hao
    Luo, Daji
    Li, Hairi
    Zhou, Yu
    Zhang, Dong-Er
    Fu, Xiang-Dong
    [J]. MOLECULAR CELL, 2017, 68 (04) : 745 - +
  • [10] METTL3-mediated m6A modification stabilizes TERRA and maintains telomere stability
    Chen, Liping
    Zhang, Canfeng
    Ma, Wenbin
    Huang, Junjiu
    Zhao, Yong
    Liu, Haiying
    [J]. NUCLEIC ACIDS RESEARCH, 2022, 50 (20) : 11619 - 11634