Time resolved applications for Cryo-EM; approaches, challenges and future directions

被引:6
|
作者
Klebl, David P. [1 ]
Aspinall, Louie [2 ]
Muench, Stephen P. [1 ]
机构
[1] Univ Leeds, Astbury Ctr Struct Mol Biol, Sch Biomed Sci, Leeds, England
[2] Univ Leeds, Sch Mol & Cellular Biol, Leeds, England
基金
英国生物技术与生命科学研究理事会;
关键词
Time-resolved; Cryo-EM; Sample preparation; Protein dynamics; CRYOELECTRON MICROSCOPY; GRID PREPARATION; ENDOCYTOSIS;
D O I
10.1016/j.sbi.2023.102696
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Developments within the cryo-EM field have allowed us to generate higher-resolution "static" structures and pull out different conformational states which exist at equilibrium within the sample. Moreover, to trap non-equilibrium states and determine conformations that are present after a defined period of time (typically in the ms time frame) new approaches have been developed for the application of time-resolved cryoEM. Here we give an overview of these different approaches and the limitations and strengths of each whilst identifying some of the current challenges to achieve higher resolutions and trap states within faster time frames. Time-resolved applications may play an important role in the ever-expanding toolkit of cryo-EM and open up new possibilities in both single particle and tomographic studies.
引用
收藏
页数:7
相关论文
共 50 条
  • [1] Microsecond Time-Resolved Cryo-EM
    Lorenz, Ulrich
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2023, 52 (SUPPL 1): : S59 - S59
  • [2] Challenges for cryo-EM
    Nature Methods, 2018, 15 : 985 - 985
  • [3] Challenges for cryo-EM
    不详
    NATURE METHODS, 2018, 15 (12) : 985 - 985
  • [4] Time-resolved cryo-EM using Spotiton
    Dandey, Venkata P.
    Budell, William C.
    Wei, Hui
    Bobe, Daija
    Maruthi, Kashyap
    Kopylov, Mykhailo
    Eng, Edward T.
    Kahn, Peter A.
    Hinshaw, Jenny E.
    Kundu, Nidhi
    Nimigean, Crina M.
    Fan, Chen
    Sukomon, Nattakan
    Darst, Seth A.
    Saecker, Ruth M.
    Chen, James
    Malone, Brandon
    Potter, Clinton S.
    Carragher, Bridget
    NATURE METHODS, 2020, 17 (09) : 897 - +
  • [5] Time-resolved cryo-EM using Spotiton
    Venkata P. Dandey
    William C. Budell
    Hui Wei
    Daija Bobe
    Kashyap Maruthi
    Mykhailo Kopylov
    Edward T. Eng
    Peter A. Kahn
    Jenny E. Hinshaw
    Nidhi Kundu
    Crina M. Nimigean
    Chen Fan
    Nattakan Sukomon
    Seth A. Darst
    Ruth M. Saecker
    James Chen
    Brandon Malone
    Clinton S. Potter
    Bridget Carragher
    Nature Methods, 2020, 17 : 897 - 900
  • [6] Structural dynamics: review of time-resolved cryo-EM
    Maeots, Mart-Erik
    Enchev, Radoslav, I
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2022, 78 : 927 - 935
  • [7] Light-coupled cryo-plunger for time-resolved cryo-EM
    Yoder, Nate
    Jalali-Yazdi, Farzad
    Noreng, Sigrid
    Houser, Alexandra
    Baconguis, Isabelle
    Gouaux, Eric
    JOURNAL OF STRUCTURAL BIOLOGY, 2020, 212 (03)
  • [8] Frozen in time: analyzing molecular dynamics with time-resolved cryo-EM
    Amann, Sascha Josef
    Keihsler, Demian
    Bodrug, Tatyana
    Brown, Nicholas G.
    Haselbach, David
    STRUCTURE, 2023, 31 (01) : 4 - 19
  • [9] Time-resolved cryo-EM visualizes the structural dynamics of translation
    Korostelev, Andrei
    Loveland, Anna
    Demo, Gabriel
    Carbone, Christine
    BIOPHYSICAL REVIEWS, 2021, 13 (06) : 1498 - 1498
  • [10] Exploring applications of crowdsourcing to cryo-EM
    Bruggemann, Jacob
    Lander, Gabriel C.
    Su, Andrew, I
    JOURNAL OF STRUCTURAL BIOLOGY, 2018, 203 (01) : 37 - 45