Proteome-wide protein-protein interactions reveal core metabolic processes and virulence mechanisms of bacterial pathogens

被引:0
|
作者
Humphreys, Ian [1 ]
Zhang, Jing [1 ]
Baek, Minkyung [1 ]
Cong, Qian [1 ]
Baker, David [1 ]
机构
[1] Univ Washington, Seattle Campus, Seattle, WA USA
关键词
D O I
10.1016/j.jbc.2023.103439
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
2387
引用
收藏
页码:S212 / S212
页数:1
相关论文
共 47 条
  • [31] A protein sequence-based deep transfer learning framework for identifying human proteome-wide deubiquitinase-substrate interactions
    Liu, Yuan
    Li, Dianke
    Zhang, Xin
    Xia, Simin
    Qu, Yingjie
    Ling, Xinping
    Li, Yang
    Kong, Xiangren
    Zhang, Lingqiang
    Cui, Chun-Ping
    Li, Dong
    NATURE COMMUNICATIONS, 2024, 15 (01)
  • [32] Insight into Bacterial Virulence Mechanisms against Host Immune Response via the Yersinia pestis-Human Protein-Protein Interaction Network
    Yang, Huiying
    Ke, Yuehua
    Wang, Jian
    Tan, Yafang
    Myeni, Sebenzile K.
    Li, Dong
    Shi, Qinghai
    Yan, Yanfeng
    Chen, Hui
    Guo, Zhaobiao
    Yuan, Yanzhi
    Yang, Xiaoming
    Yang, Ruifu
    Du, Zongmin
    INFECTION AND IMMUNITY, 2011, 79 (11) : 4413 - 4424
  • [33] Proteome-wide analyses reveal diverse functions of protein acetylation and succinylation modifications in fast growing stolons of bermudagrass (Cynodon dactylon L.)
    Zhang, Bing
    Chen, Zhuoting
    Sun, Qixue
    Liu, Jianxiu
    BMC PLANT BIOLOGY, 2022, 22 (01)
  • [34] Proteome-wide analyses reveal diverse functions of protein acetylation and succinylation modifications in fast growing stolons of bermudagrass (Cynodon dactylon L.)
    Bing Zhang
    Zhuoting Chen
    Qixue Sun
    Jianxiu Liu
    BMC Plant Biology, 22
  • [35] The Integration of Proteome-Wide PTM Data with Protein Structural and Sequence Features Identifies Phosphorylations that Mediate 14-3-3 Interactions
    Egbert, C. M.
    Warr, L. R.
    Pennington, K. L.
    Thornton, M. M.
    Vaughan, A. J.
    Ashworth, S. W.
    Heaton, M. J.
    English, N.
    Torres, M. P.
    Andersen, J. L.
    JOURNAL OF MOLECULAR BIOLOGY, 2023, 435 (02)
  • [36] Implementing a Novel Proteome-Wide Biochemical Screen to Define Sequence Motifs That Support Binding to the Core Autophagy Protein LC3B
    Kosmatka, Jen
    Davis, Joey
    Keating, Amy
    PROTEIN SCIENCE, 2023, 32 (12)
  • [37] SpirPro: A Spirulina proteome database and web-based tools for the analysis of protein-protein interactions at the metabolic level in Spirulina (Arthrospira) platensis C1
    Senachak, Jittisak
    Cheevadhanarak, Supapon
    Hongsthong, Apiradee
    BMC BIOINFORMATICS, 2015, 16
  • [38] SpirPro: A Spirulina proteome database and web-based tools for the analysis of protein-protein interactions at the metabolic level in Spirulina (Arthrospira) platensis C1
    Jittisak Senachak
    Supapon Cheevadhanarak
    Apiradee Hongsthong
    BMC Bioinformatics, 16
  • [39] Computational prediction of Homo sapiens-Candida albicans protein-protein interactions reveal key virulence factors using dual RNA-Seq data analysis
    Kaur, Ekjot
    Acharya, Vishal
    ARCHIVES OF MICROBIOLOGY, 2025, 207 (05)
  • [40] Systematic analysis of chemical-protein interactions from zebrafish embryo by proteome-wide thermal shift assay, bridging the gap between molecular interactions and toxicity pathways
    Lizano-Fallas, Veronica
    del Amor, Ana Carrasco
    Cristobal, Susana
    JOURNAL OF PROTEOMICS, 2021, 249