Proteome-wide protein-protein interactions reveal core metabolic processes and virulence mechanisms of bacterial pathogens

被引:0
|
作者
Humphreys, Ian [1 ]
Zhang, Jing [1 ]
Baek, Minkyung [1 ]
Cong, Qian [1 ]
Baker, David [1 ]
机构
[1] Univ Washington, Seattle Campus, Seattle, WA USA
关键词
D O I
10.1016/j.jbc.2023.103439
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
2387
引用
收藏
页码:S212 / S212
页数:1
相关论文
共 47 条
  • [1] PrePPI: A Structure Informed Proteome-wide Database of Protein-Protein Interactions
    Petrey, Donald
    Zhao, Haiqing
    Trudeau, Stephen J.
    Murray, Diana
    Honig, Barry
    JOURNAL OF MOLECULAR BIOLOGY, 2023, 435 (14)
  • [2] Proteome-wide prediction of protein-protein interactions from high-throughput data
    Liu, Zhi-Ping
    Chen, Luonan
    PROTEIN & CELL, 2012, 3 (07) : 508 - 520
  • [3] Proteome-wide prediction of protein-protein interactions from high-throughput data
    ZhiPing Liu
    Luonan Chen
    Protein & Cell, 2012, 3 (07) : 508 - 520
  • [4] Proteome-wide, Structure-Based Prediction of Protein-Protein Interactions/New Molecular Interactions Viewer
    Dong, Shaowei
    Lau, Vincent
    Song, Richard
    Ierullo, Matthew
    Esteban, Eddi
    Wu, Yingzhou
    Sivieng, Teeratham
    Nahal, Hardeep
    Gaudinier, Allison
    Pasha, Asher
    Oughtred, Rose
    Dolinski, Kara
    Tyers, Mike
    Brady, Siobhan M.
    Grene, Ruth
    Usadel, Bjorn
    Provarta, Nicholas J.
    PLANT PHYSIOLOGY, 2019, 179 (04) : 1893 - 1907
  • [5] Targeted and proteome-wide analysis of metabolite-protein interactions
    Tsukidate, Taku
    Li, Qiang
    Hang, Howard C.
    CURRENT OPINION IN CHEMICAL BIOLOGY, 2020, 54 : 19 - 27
  • [6] InSite: a computational method for identifying protein-protein interaction binding sites on a proteome-wide scale
    Wang, Haidong
    Segal, Eran
    Ben-Hur, Asa
    Li, Qian-Ru
    Vidal, Marc
    Koller, Daphne
    GENOME BIOLOGY, 2007, 8 (09)
  • [7] InSite: a computational method for identifying protein-protein interaction binding sites on a proteome-wide scale
    Haidong Wang
    Eran Segal
    Asa Ben-Hur
    Qian-Ru Li
    Marc Vidal
    Daphne Koller
    Genome Biology, 8
  • [8] Proteome-wide protein interaction measurements of bacterial proteins of unknown function
    Meier, Matthias
    Sit, Rene V.
    Quake, Stephen R.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (02) : 477 - 482
  • [9] Learning the protein language of proteome-wide protein-protein binding sites via explainable ensemble deep learning
    Hou, Zilong
    Yang, Yuning
    Ma, Zhiqiang
    Wong, Ka-chun
    Li, Xiangtao
    COMMUNICATIONS BIOLOGY, 2023, 6 (01)
  • [10] Learning the protein language of proteome-wide protein-protein binding sites via explainable ensemble deep learning
    Zilong Hou
    Yuning Yang
    Zhiqiang Ma
    Ka-chun Wong
    Xiangtao Li
    Communications Biology, 6