Reduced modelling and optimal control of epidemiological individual-based models with contact heterogeneity

被引:3
作者
Courtes, C. [1 ]
Franck, E. [2 ]
Lutz, K. [3 ]
Navoret, L. [1 ]
Privat, Y. [1 ,4 ]
机构
[1] Univ Strasbourg, IRMA, Strasbourg, France
[2] Univ Strasbourg, IRMA, INRIA, Strasbourg, France
[3] Univ Lyon, Ecole Cent Lyon, Ecully, France
[4] Inst Univ France IUF, Paris, France
关键词
individual-based models; neural network; optimal control; reduced models; super-spreaders; SPREAD; SIZE;
D O I
10.1002/oca.2970
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Modelling epidemics using classical population-based models suffers from shortcomings that so-called individual-based models are able to overcome, as they are able to take into account heterogeneity features, such as super-spreaders, and describe the dynamics involved in small clusters. In return, such models often involve large graphs which are expensive to simulate and difficult to optimize, both in theory and in practice. By combining the reinforcement learning philosophy with reduced models, we propose a numerical approach to determine optimal health policies for a stochastic individual-based model taking into account heterogeneity in the population. More precisely, we introduce a deterministic reduced population-based model involving a neural network, designed to faithfully mimic the local dynamics of the more complex individual-based model. Then the optimal control is determined by sequentially training the network until an optimal strategy for the population-based model succeeds in also containing the epidemic when simulated on the individual-based model. After describing the practical implementation of the method, several numerical tests are proposed to demonstrate its ability to determine controls for models with contact heterogeneity.
引用
收藏
页码:459 / 493
页数:35
相关论文
共 47 条
[1]   On closures for reduced order models-A spectrum of first-principle to machine-learned avenues [J].
Ahmed, Shady E. ;
Pawar, Suraj ;
San, Omer ;
Rasheed, Adil ;
Iliescu, Traian ;
Noack, Bernd R. .
PHYSICS OF FLUIDS, 2021, 33 (09)
[2]   Optimization and Control of Agent-Based Models in Biology: A Perspective [J].
An, G. ;
Fitzpatrick, B. G. ;
Christley, S. ;
Federico, P. ;
Kanarek, A. ;
Neilan, R. Miller ;
Oremland, M. ;
Salinas, R. ;
Laubenbacher, R. ;
Lenhart, S. .
BULLETIN OF MATHEMATICAL BIOLOGY, 2017, 79 (01) :63-87
[3]   COVID-19 dynamics across the US: A deep learning study of human mobility and social behavior [J].
Bhouri, Mohamed Aziz ;
Costabal, Francisco Sahli ;
Wang, Hanwen ;
Linka, Kevin ;
Peirlinck, Mathias ;
Kuhl, Ellen ;
Perdikaris, Paris .
COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, 2021, 382
[4]   Optimal Immunity Control and Final Size Minimization by Social Distancing for the SIR Epidemic Model [J].
Bliman, Pierre-Alexandre ;
Duprez, Michel ;
Privat, Yannick ;
Vauchelet, Nicolas .
JOURNAL OF OPTIMIZATION THEORY AND APPLICATIONS, 2021, 189 (02) :408-436
[5]   How best can finite-time social distancing reduce epidemic final size? [J].
Bliman, Pierre-Alexandre ;
Duprez, Michel .
JOURNAL OF THEORETICAL BIOLOGY, 2021, 511
[6]  
Capobianco R, 2021, J ARTIF INTELL RES, V71, P953, DOI [10.1613/jair.1.12632, DOI 10.1613/JAIR.1.12632, 10.1613/jair.1.12632]
[7]  
Chollet F., 2015, Keras
[8]  
Coddington E.A., 1955, THEORY ORDINARY DIFF
[9]  
Conn AR, 2009, MOS-SIAM SER OPTIMIZ, V8, P1
[10]   Simple epidemic network model for highly heterogeneous populations [J].
del Valle Rafo, Maria ;
Pablo Aparicio, Juan .
JOURNAL OF THEORETICAL BIOLOGY, 2020, 486