Paramagnetic NMR to study iron sulfur proteins: 13C detected experiments illuminate the vicinity of the metal center

被引:4
作者
Querci, Leonardo [1 ]
Grifagni, Deborah [1 ]
Trindade, Ines B. [2 ,3 ]
Silva, Jose Malanho [1 ]
Louro, Ricardo O. [2 ]
Cantini, Francesca [1 ]
Piccioli, Mario [1 ]
机构
[1] Univ Florence, Magnet Resonance Ctr, Dept Chem, Via L Sacconi 6, I-50019 Sesto Fiorentino, Italy
[2] Univ Nova Lisboa, Inst Tecnol Quim & Biol Antonio Xavier ITQB NOVA, Ave Republ EAN, P-2780157 Oeiras, Portugal
[3] CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
关键词
Paramagnetic NMR; C-13; NMR; Iron-Sulfur proteins; Optimized C-13 experiments; Transverse relaxation; NEET proteins; RELAXATION ENHANCEMENT; MONOMERIC COPPER; CLUSTER; OPTIMIZATION; COMPLEXES; HETERONUCLEAR; SPECTROSCOPY; INFORMATION; ASSIGNMENTS; RESONANCES;
D O I
10.1007/s10858-023-00425-4
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The robustness of NMR coherence transfer in proximity of a paramagnetic center depends on the relaxation properties of the nuclei involved. In the case of Iron-Sulfur Proteins, different pulse schemes or different parameter sets often provide complementary results. Tailored versions of HCACO and CACO experiments significantly increase the number of observed C-alpha/C' connectivities in highly paramagnetic systems, by recovering many resonances that were lost due to paramagnetic relaxation. Optimized( 13)C direct detected experiments can significantly extend the available assignments, improving the overall knowledge of these systems. The different relaxation properties of C-alpha and C' nuclei are exploited in CACO vs COCA experiments and the complementarity of the two experiments is used to obtain structural information. The two [Fe2S2](+) clusters containing NEET protein CISD3 and the one [Fe4S4](2+) cluster containing HiPIP protein PioC have been taken as model systems. We show that tailored experiments contribute to decrease the blind sphere around the cluster, to extend resonance assignment of cluster bound cysteine residues and to retrieve details on the topology of the iron-bound ligand residues.
引用
收藏
页码:247 / 259
页数:13
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