Signal Transducer and Activator of Transcription 6 Changes and Protein Frustration by Single Amino Acid Substitutions: Implications for Cancer Progression

被引:1
作者
Alharethi, Salem Hussain [1 ]
Kamal, Tahseen [2 ,3 ]
Alharbi, Bandar [4 ]
Alhassan, Hassan H. [5 ]
Hakami, Mohammed Ageeli [6 ]
Alotaibi, Bader Saud [6 ]
Rub, Malik Abdul [2 ]
Marwani, Hadi M. [3 ]
Alamry, Khalid A. [3 ]
Asiri, Abdullah M. [2 ,3 ]
Azum, Naved [2 ,7 ]
机构
[1] Najran Univ, Coll Arts & Sci, Dept Biol Sci, Najran, Saudi Arabia
[2] King Abdulaziz Univ, Ctr Excellence Adv Mat Res, Jeddah, Saudi Arabia
[3] King Abdulaziz Univ, Fac Sci, Chem Dept, Jeddah, Saudi Arabia
[4] Univ Hail, Coll Appl Med Sci, Dept Med Lab Sci, Hail, Saudi Arabia
[5] Jouf Univ, Coll Appl Sci, Dept Clin Lab Sci, Sakaka, Saudi Arabia
[6] Shaqra Univ, Coll Appl Med Sci, Dept Clin Lab Sci, Riyadh, Saudi Arabia
[7] King Abdulaziz Univ, Ctr Excellence Adv Mat Res, Bldg 115, Jeddah 21589, Saudi Arabia
关键词
STAT6; cancer; protein frustration; single amino acid substitutions; bioinformatics; computational biology; STRUCTURAL BASIS; PROSTATE-CANCER; STABILITY; STABILIZATION; ASSOCIATION; PREDICTION; MUTATIONS; VARIANTS; DATABASE; KINASE;
D O I
10.1089/omi.2023.0020
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Signal transducer and activator of transcription 6 (STAT6) is a multifunctional protein that plays critical functions in cell proliferation, apoptosis, differentiation, and angiogenesis. Mutations in STAT6 may contribute to the development of certain complex diseases such as cancer. This study examined single amino acid substitutions in STAT6 to pinpoint deleterious variants and their related structural and functional impairments. Data on STAT6 mutations were obtained from the Ensembl database and analyzed to evaluate the selected mutations for their pathogenicity and destabilizing or harmful effects. Specifically, we analyzed aggregation propensity, nonpacking density, and accessible surface area on the chosen mutations. The results suggest that seven out of eight mutations are less soluble, which might lead to aggregation, disrupt ordered helices, and alter strand propensity. Four mutations lay in the conserved regions of the protein, as revealed by the Consurf analysis. We found that three mutations, E318G, L365F, and R562H, change hydrophobic contacts and lead to frustration of STAT6, which can alter its stability, contributing to disease progression in cancer. In conclusion, these findings inform how single amino acid changes can destabilize STAT6. This has implications for cancer progression which warrants further experimental research.
引用
收藏
页码:171 / 179
页数:9
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